Specific Information of Small Protein : SPROHSA61818
General Information
| Small Protein ID | SPROHSA61818 |
| Organism | Human (Homo sapiens) |
| Small Protein Sequence | TLPGLQHLLGPARSLVSPLGAAAAAVAATRKEVRDAARSPPPPCPRIKVKEVKTDAGVRMRMNLKKENWYSKRMVRSMLR* |
| RNA Sequence | ACGTTGCCTGGCCTCCAGCACCTACTTGGTCCCGCGCGCTCCCTCGTGTCGCCCCTCGGAGCAGCAGCCGCCGCGGTCGCCGCTACCCGGAAAGAAGTCAGAGACGCCGCGAGGTCGCCGCCACCGCCATGCCCAAGAATAAAGGTAAAGGAGGTAAAAACAGACGCAGGGGTAAGAATGAGAATGAATCTGAAAAAAGAGAACTGGTATTCAAAGAGGATGGTCAGGAGTATGCTCAGGTAA |
| Protein Length | 80 |
| Start Codon | ACG |
| Location | chrX:20135826-20141768:- |
| Blocks | 20135826-20135841,20138538-20138622,20141624-20141768 |
| Mean PhyloCSF | -7.18886419113 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSG00000173674; EIF1AX; ENSG00000201882; RF00493; ENSG00000201592; RF00494; ENSG00000225037; EIF1AX-AS1; NONHSAG054127;NONHSAG054128;NONHSAG103304; |
| Mass (Da) | mono. 8797.8; avg. 8803.4 |
Ribosome profiling
| Min Ribo P value | 0.006574 |
| Min TIS P value | 0.019474 |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| SRR964946_alt | HEK293 | WT | SRR964946 | 22927429; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| No results |
| Disease | Detected |
|---|
| No results |
Related Variants
| Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
|---|
| No results |
Related Small Proteins with Different TISs
SmProt