Specific Information of Small Protein : SPROHSA375927
General Information
Small Protein IDSPROHSA375927
OrganismHuman (Homo sapiens)
Small Protein SequenceLPGLQHLLGPARSLVSPLGAAAAAVAATRKEVRDAARSPPPPCPRIKVKEVKTDAGVRMRMNLKKENWYSKRMVRSMLR*
RNA SequenceTTGCCTGGCCTCCAGCACCTACTTGGTCCCGCGCGCTCCCTCGTGTCGCCCCTCGGAGCAGCAGCCGCCGCGGTCGCCGCTACCCGGAAAGAAGTCAGAGACGCCGCGAGGTCGCCGCCACCGCCATGCCCAAGAATAAAGGTAAAGGAGGTAAAAACAGACGCAGGGGTAAGAATGAGAATGAATCTGAAAAAAGAGAACTGGTATTCAAAGAGGATGGTCAGGAGTATGCTCAGGTAA
Protein Length79
Start CodonTTG
LocationchrX:20135826-20141765:-
Blocks20135826-20135841,20138538-20138622,20141624-20141765
Mean PhyloCSF-7.23471666103
Data SourceRibosome profiling;
Related GenesENSG00000173674; EIF1AX; ENSG00000201882; RF00493; ENSG00000201592; RF00494; ENSG00000225037; EIF1AX-AS1; NONHSAG054127;NONHSAG054128;NONHSAG103304;
Mass (Da)mono. 8696.8; avg. 8702.3
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE45833_2_altENSG00000173674.11ENST00000379607.10EIF1AXProtein_coding5'UTR2.826E-08None7331315085.8254173
GSE58207_altENSG00000173674.11ENST00000379607.10EIF1AXProtein_coding5'UTR0.0001750.02809973313683293.082460
SRR618770,618771,618772,618773_altENSG00000173674.11ENST00000379607.10EIF1AXProtein_coding5'UTR0.0002573.343E-1973313842592.267712
SRR964946_altENSG00000173674.11ENST00000379607.10EIF1AXProtein_coding5'UTR0.0057170.00391173313NANA
Min Ribo P value2.826E-08
Min TIS P value3.343E-19
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE45833_2_altBJ cellsQuiescenceGSM1047586; GSM104758723594524;
GSE58207_altHCT116Colorectal carcinomaGSM1403307; GSM140330825510491;
SRR618770,618771,618772,618773_altHEK293WTSRR618770; SRR618771; SRR618772; SRR618773NA;
SRR964946_altHEK293WTSRR96494622927429;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA2079097ATG-16685940-16685964
SPROHSA24988817CTG-16685940-16685994
SPROHSA14411319ATG-16685940-16686000
SPROHSA14411419ATG-20135826-20135841, 20138538-20138583
SPROHSA15085721ATG-16685940-16686006
SPROHSA15085821ATG-20135826-20135841, 20138538-20138589
SPROHSA36213965GTG-20135826-20135841, 20138538-20138622, 20141624-20141723
SPROHSA6181880ACG-20135826-20135841, 20138538-20138622, 20141624-20141768
SPROHSA30511788CTG-20135826-20135841, 20138538-20138622, 20141624-20141792