Specific Information of Small Protein : SPROHSA356118
General Information
Small Protein IDSPROHSA356118
OrganismHuman (Homo sapiens)
Small Protein SequenceVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCDPSDQNP*
RNA SequenceGTGGGGCTGGGCTCTGAGATGACCACCGTACCCCTACTGCATGCAGCCATCCGGGAGGTGGATATCAAGGGCGTGTTTCGATACTGCAACACGTGGCCAGTGGCGATTTCGATGCTTGCGTCCAAGTCTGTGAATGTAAAACCCCTCGTCACCCATAGGTTTCCTCTGGAGAAAGCTCTGGAGGCCTTTGAAACATTTAAAAAGGGATTGGGGTTGAAAATCATGCTCAAGTGTGACCCCAGTGACCAGAATCCCTGA
Protein Length85
Start CodonGTG
Locationchr15:44827055-44828541:-
Blocks44827055-44827221,44828449-44828541
Mean PhyloCSF-3.10969382663
Data SourceRibosome profiling;
Related GenesENSG00000259479; SORD2P; ENSG00000259187; AC122108.1; NONHSAG016753;NONHSAG016754;
Mass (Da)mono. 9392; avg. 9398
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE45833_2_altENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.000122None190448136.91925845
GSE45833_3_altENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.027721None1904481013.7789694
GSE103308_altENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel8.643E-09None19044817861.3695104
GSE58207_altENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel7.474E-110.00046719044822891.0113399
SRR4045277_altENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.000122None19044811129.271436
GSE97140_altENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.040458None1904481427.4464843
GSE45833_2_altENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel0.000122None231489136.91925845
GSE45833_3_altENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel0.027721None2314891013.7789694
GSE58207_altENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel7.474E-110.00411523148922891.0113399
SRR4045277_altENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel0.000122None23148911129.271436
GSE97140_altENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel0.040458None2314891427.4464843
GSE45833_3_altENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.027721None93111891013.7789694
GSE58207_altENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel7.474E-110.004115931118922891.0113399
SRR4045277_altENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.000122None931118911129.271436
GSE97140_altENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.040458None93111891427.4464843
Min Ribo P value7.474E-11
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE103308_altRD-muscleWTGSM276024729696588;
GSE45833_2_altBJ cellsQuiescenceGSM1047586; GSM104758723594524;
GSE45833_3_altBJ cellsPre-senescenceGSM104758823594524;
GSE58207_altHCT116Colorectal carcinomaGSM1403307; GSM140330825510491;
GSE97140_altFlp-In T-REx-293WTGSM2552194; GSM255219528520920;
SRR4045277_altplatelet-like particlesWTGSM228591027681415;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
Gene3DG3DSA:3.90.180.1027671.9E-21T
PANTHERPTHR43161:SF91818.4E-26T
Gene3DG3DSA:3.40.50.7201261.9E-21T
SUPERFAMILYSSF5012921769.18E-5TIPR011032GroES-like superfamily
PANTHERPTHR431611818.4E-26T
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA11740312ATC+45073491-45073530
SPROHSA38728116TTG-44827055-44827106
SPROHSA3477818AAG-44827055-44827112
SPROHSA3477918AAG+45073473-45073530
SPROHSA28873626CTG-44827055-44827136
SPROHSA28873726CTG+45073449-45073530
SPROHSA17871448ATG-44827055-44827202
SPROHSA24637750ATT+45073377-45073530
SPROHSA6093555ACG+45072436-45072438, 45073364-45073530
SPROHSA11215064ATC+45072409-45072438, 45073364-45073530
SPROHSA26735573CTG-44827055-44827221, 44828449-44828505
SPROHSA14700879ATG-44827055-44827221, 44828449-44828523
SPROHSA30247583CTG-44827055-44827221, 44828449-44828535
SPROHSA30247683CTG+45072352-45072438, 45073364-45073530
SPROHSA33913087GTG-44827055-44827221, 44828449-44828547
SPROHSA13027597ATC+45069046-45069052, 45072316-45072438, 45073364-45073530
SPROHSA13027797ATC-44827055-44827221, 44828449-44828571, 44831528-44831534
SPROHSA19348196ATG-44827055-44827221, 44828449-44828571, 44830236-44830239