Specific Information of Small Protein : SPROHSA130275
General Information
Small Protein IDSPROHSA130275
OrganismHuman (Homo sapiens)
Small Protein SequenceIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCDPSDQNP*
RNA SequenceATCTACGCCACTCGCTCTGGTGGGAACCTCGTGCTTGTGGGGCTGGGCTCTGAGATGACCACCGTACCCCTACTGCATGCAGCCATCCGGGAGGTGGATATCAAGGGCGTGTTTCGATACTGCAACACGTGGCCAGTGGCGATTTCGATGCTTGCGTCCAAGTCTGTGAATGTAAAACCCCTCGTCACCCATAGGTTTCCTCTGGAGAAAGCTCTGGAGGCCTTTGAAACATTTAAAAAGGGATTGGGGTTGAAAATCATGCTCAAGTGTGACCCCAGTGACCAGAATCCCTGA
Protein Length97
Start CodonATC
Locationchr15:45069046-45073530:+
Blocks45069046-45069052,45072316-45072438,45073364-45073530
Mean PhyloCSF6.09095237759
Data SourceRibosome profiling;
Related GenesENSG00000140263; SORD; ENSG00000259352; AC091117.1; NONHSAG016761;
Mass (Da)mono. 10636.7; avg. 10643.5
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE119615_1_altENSG00000140263.14ENST00000558580.1SORDProtein_codingTruncated0.0045990.007039823111712140.276752
GSE119615_1_altENSG00000140263.14ENST00000267814.14SORDProtein_codingTruncated0.0045990.002171869116312140.276752
SRR618770,618771,618772,618773_altENSG00000140263.14ENST00000267814.14SORDProtein_codingTruncated8.815E-100.02510786911636336.1751572
Min Ribo P value8.815E-10
Min TIS P value0.002171
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE119615_1_altNon-differentiated SH-SY5Y cellsNeuroblastomaGSM3378857; GSM3378858; GSM3378859; GSM337886031109297;
SRR618770,618771,618772,618773_altHEK293WTSRR618770; SRR618771; SRR618772; SRR618773NA;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
PANTHERPTHR431611938.5E-31T
Gene3DG3DSA:3.90.180.1018971.6E-15T
PANTHERPTHR43161:SF91938.5E-31T
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA11740312ATC+45073491-45073530
SPROHSA38728116TTG-44827055-44827106
SPROHSA3477818AAG-44827055-44827112
SPROHSA3477918AAG+45073473-45073530
SPROHSA28873626CTG-44827055-44827136
SPROHSA28873726CTG+45073449-45073530
SPROHSA17871448ATG-44827055-44827202
SPROHSA24637750ATT+45073377-45073530
SPROHSA6093555ACG+45072436-45072438, 45073364-45073530
SPROHSA11215064ATC+45072409-45072438, 45073364-45073530
SPROHSA26735573CTG-44827055-44827221, 44828449-44828505
SPROHSA14700879ATG-44827055-44827221, 44828449-44828523
SPROHSA30247583CTG-44827055-44827221, 44828449-44828535
SPROHSA30247683CTG+45072352-45072438, 45073364-45073530
SPROHSA35611885GTG-44827055-44827221, 44828449-44828541
SPROHSA33913087GTG-44827055-44827221, 44828449-44828547