Specific Information of Small Protein : SPROHSA147008
General Information
Small Protein IDSPROHSA147008
OrganismHuman (Homo sapiens)
Small Protein SequenceMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCDPSDQNP*
RNA SequenceATGACCACCGTACCCCTACTGCATGCAGCCATCCGGGAGGTGGATATCAAGGGCGTGTTTCGATACTGCAACACGTGGCCAGTGGCGATTTCGATGCTTGCGTCCAAGTCTGTGAATGTAAAACCCCTCGTCACCCATAGGTTTCCTCTGGAGAAAGCTCTGGAGGCCTTTGAAACATTTAAAAAGGGATTGGGGTTGAAAATCATGCTCAAGTGTGACCCCAGTGACCAGAATCCCTGA
Protein Length79
Start CodonATG
Locationchr15:44827055-44828523:-
Blocks44827055-44827221,44828449-44828523
Mean PhyloCSF-3.81913335323
Data SourceRibosome profiling;
Related GenesENSG00000259479; SORD2P; ENSG00000259187; AC122108.1; NONHSAG016753;NONHSAG016754;
Mass (Da)mono. 8849.7; avg. 8855.4
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR5512738ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.000939None2084483518.4871291
SRR3208885ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel1.953E-06None2084483022.4576421
SRR3208885_altENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel1.953E-06None2084483022.4576421
GSE45833_2ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.001206None208448105.72169449
GSE45833_5ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.03611None20844834.81788955
SRR4045276ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel1.89E-10None2084486362.1707761
GSE103308ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel1.908E-07None20844815858.5596143
GSE105082ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel1.26E-09None20844812334.8268490
GSE94454ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel2.782E-20None20844835365.4751568
SRR5047772ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.035144None20844875.15733283
SRR5047771ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel2.297E-09None2084485911.2425002
SRR5047770ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel2.502E-07None208448309.91752428
GSE94613_2ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.020282None2084485951.1539782
SRR7207252ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel4.643E-05None2084484953.9926198
SRR4045277ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.000381None20844810126.333449
GSE83493ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.003386None2084489848.9349791
GSE119615_1_altENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel0.0022140.011742084488114.559347
SRR2991181ENSG00000259479.6ENST00000562107.1SORD2PTranscribed_unprocessed_pseudogeneNovel1.21E-08None2084485537.4567830
SRR3208885ENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel1.953E-06None2494893022.4576421
SRR3208885_altENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel1.953E-06None2494893022.4576421
GSE45833_5ENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel0.03611None24948934.81788955
SRR5047772ENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel0.035144None24948975.15733283
SRR5047770ENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel2.502E-07None249489309.91752428
SRR7207252ENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel4.643E-05None2494894953.9926198
SRR4045277ENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel0.000381None24948910126.333449
GSE119615_1_altENSG00000259479.6ENST00000564140.5SORD2PTranscribed_unprocessed_pseudogeneNovel0.0022140.0337342494898114.559347
SRR5512738ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.000939None94911893518.4871291
SRR3208885ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel1.953E-06None94911893022.4576421
SRR3208885_altENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel1.953E-06None94911893022.4576421
GSE45833_2ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.001206None9491189105.72169449
GSE45833_5ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.03611None949118934.81788955
SRR4045276ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel1.89E-10None94911896362.1707761
GSE103308ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel1.908E-07None949118915858.5596143
GSE105082ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel1.26E-09None949118912334.8268490
GSE94454ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel2.782E-20None949118935365.4751568
SRR5047772ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.035144None949118975.15733283
SRR5047771ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel2.297E-09None94911895911.2425002
SRR5047770ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel2.502E-07None9491189309.91752428
GSE94613_2ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.020282None94911895951.1539782
SRR7207252ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel4.643E-05None94911894953.9926198
SRR4045277ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.000381None949118910126.333449
GSE83493ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.003386None94911899848.9349791
GSE119615_1_altENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel0.0022140.0117494911898114.559347
SRR2991181ENSG00000259479.6ENST00000561384.3SORD2PTranscribed_unprocessed_pseudogeneNovel1.21E-08None94911895537.4567830
Min Ribo P value2.782E-20
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE103308RD-muscleWTGSM276024729696588;
GSE105082HELACervical cancerGSM2817679; GSM281768030591072;
GSE119615_1_altNon-differentiated SH-SY5Y cellsNeuroblastomaGSM3378857; GSM3378858; GSM3378859; GSM337886031109297;
GSE45833_2BJ cellsQuiescenceGSM1047586; GSM104758723594524;
GSE45833_5BJ cellsSenescenceGSM104759023594524;
GSE83493HeLa S3Cervical cancerGSM2204389; GSM2204390; GSM2204391; GSM220439228460002;
GSE94454Huh7HepatomaGSM2476003; GSM2476004; GSM247600528323820;
GSE94613_2MOLM13Acute myeloid leukemiaGSM248105329186125;
SRR2991181SH-SY5YNeuroblastomaGSM197051831109297;
SRR3208885ES cell-derived neurons TSC2+/+WTGSM208253727655340;
SRR3208885_altES cell-derived neurons TSC2+/+WTGSM208253727655340;
SRR4045276Meg01 cellsWTGSM228590927681415;
SRR4045277platelet-like particlesWTGSM228591027681415;
SRR5047770iPSC-differentiated dopamine neuronsParkinson DiseaseGSM2402496; GSM2402497; GSM2402498NA;
SRR5047771iPSC-differentiated dopamine neuronsParkinson DiseaseNANA;
SRR5047772iPSC-differentiated dopamine neuronsParkinson DiseaseNANA;
SRR5512738GM19147-Lymphoblastoid Cell LineWTGSM260131229950183;
SRR7207252MCF10A-ER-SrcBreast adenocarcinomaGSM315026530089253;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
Gene3DG3DSA:3.90.180.102798.6E-16T
PANTHERPTHR431612752.0E-23T
PANTHERPTHR43161:SF92752.0E-23T
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA11740312ATC+45073491-45073530
SPROHSA38728116TTG-44827055-44827106
SPROHSA3477818AAG-44827055-44827112
SPROHSA3477918AAG+45073473-45073530
SPROHSA28873626CTG-44827055-44827136
SPROHSA28873726CTG+45073449-45073530
SPROHSA17871448ATG-44827055-44827202
SPROHSA24637750ATT+45073377-45073530
SPROHSA6093555ACG+45072436-45072438, 45073364-45073530
SPROHSA11215064ATC+45072409-45072438, 45073364-45073530
SPROHSA26735573CTG-44827055-44827221, 44828449-44828505
SPROHSA30247583CTG-44827055-44827221, 44828449-44828535
SPROHSA30247683CTG+45072352-45072438, 45073364-45073530
SPROHSA35611885GTG-44827055-44827221, 44828449-44828541
SPROHSA33913087GTG-44827055-44827221, 44828449-44828547
SPROHSA13027597ATC+45069046-45069052, 45072316-45072438, 45073364-45073530
SPROHSA13027797ATC-44827055-44827221, 44828449-44828571, 44831528-44831534
SPROHSA19348196ATG-44827055-44827221, 44828449-44828571, 44830236-44830239