Specific Information of Small Protein : SPROHSA14445
General Information
| Small Protein ID | SPROHSA14445 |
| Organism | Human (Homo sapiens) |
| Small Protein Sequence | KQEELYRNVKNIYVCFTCGMKKMRTSGQNCLSSEFHAGRKVRRNF* |
| RNA Sequence | AAGCAAGAAGAATTGTATAGAAATGTAAAAAACATTTATGTGTGCTTCACATGTGGCATGAAAAAAATGAGGACCTCTGGTCAAAATTGCCTGAGTTCAGAATTTCATGCTGGAAGGAAAGTTAGACGTAACTTCTAA |
| Protein Length | 45 |
| Start Codon | AAG |
| Location | chr3:101779931-101782244:+ |
| Blocks | 101779931-101779934,101782109-101782244 |
| Mean PhyloCSF | -8.72093475383 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSG00000144815; NXPE3; |
| Mass (Da) | mono. 5355.7; avg. 5359.2 |
Ribosome profiling
| Ribo-seq ID | Ensembl Gene ID | Ensembl Transcript ID | Symbol | Gene Type | TIS Type | Ribo P value | TIS P value | Start On Trans | Stop On Trans | In-frame Count | Ribo-seq RPKM |
|---|
| GSE94613_1_alt | ENSG00000144815.16 | ENST00000474165.5 | NXPE3 | Protein_coding | 5'UTR | 0.034522 | None | 277 | 415 | 7 | 29.3008006 |
| GSE94613_1_alt | ENSG00000144815.16 | ENST00000487830.1 | NXPE3 | Protein_coding | Novel | 0.034522 | None | 437 | 575 | 7 | 29.3008006 |
| Min Ribo P value | 0.034522 |
| Min TIS P value | None |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| GSE94613_1_alt | MOLM13 | Acute myeloid leukemia | GSM2481052 | 29186125; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| No results |
| Disease | Detected |
|---|
| No results |
Related Variants
| Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
|---|
| 3-101782136-A-C | Non-Synonymous p.K10N | rs2466368 | SRR4045276; SRR5047770; SRR5047772; SRR7207252 |
Related Small Proteins with Different TISs
SmProt