Specific Information of Variant: 10-116272107-G-A
General Information
Variant ID10-116272107-G-A
Genome Positionchr10:116272107
ClinVar.

Related Small Proteins
SmProt IDLengthStart CodonStrandBlocksConsequence
SPROHSA12159298ATC-116271054-116271115,116271989-116272225Non-Synonymous p.T40M
SPROHSA18646819ATG-116272101-116272161Non-Synonymous p.R19C
SPROHSA25174517CTG-116272101-116272155Non-Synonymous p.R17C
SPROHSA26047971CTG-116272003-116272216Non-Synonymous p.T37M
SPROHSA26048095CTG-116271054-116271115,116271989-116272216Non-Synonymous p.T37M
SPROHSA31138941CTG-116272003-116272126Non-Synonymous p.T7M

Data sources
SourceAllele CountAllele Frequency
gnomAD3821370.57388
1KGP325030.4998
TOPMed718830.57246
GAsP15920.457
NyuWa32110.53535
Ribosome profilingSRR2818787; SRR3208885; SRR3208921; SRR5047770; SRR5350740; SRR5990809; SRR5990810; SRR5990811; SRR6838651; SRR8310197; SRR8310201; SRR8310198; SRR8310199; SRR8310200; SRR8310205; SRR810100; SRR810101; SRR1795427

5'UTR Effect
Variant TypeuAUG_gained
GeneGFRA1
ContextAGCGTGC
Kozak SequenceTGCATGC
Kozak StrengthWeak
Effectout-of-frame_oORF
Distance to CDS79
Distance to Alt Stop.