Specific Information of Variant: 10-116272107-G-A
General Information
Variant ID10-116272107-G-A
Genome Positionchr10:116272107
ClinVar.

Related Small Proteins
IDLengthStart CodonStrandBlocksConsequence
SPROHSA12159298ATC-116271054-116271115,116271989-116272225Non-Synonymous p.T40M
SPROHSA18646819ATG-116272101-116272161Non-Synonymous p.R19C
SPROHSA25174517CTG-116272101-116272155Non-Synonymous p.R17C
SPROHSA26047971CTG-116272003-116272216Non-Synonymous p.T37M
SPROHSA26048095CTG-116271054-116271115,116271989-116272216Non-Synonymous p.T37M
SPROHSA31138941CTG-116272003-116272126Non-Synonymous p.T7M

Data sources
SourceAllele CountAllele Frequency
gnomAD3821375.73879e-01
1KGP325030.4998
TOPMed718830.572463
GAsP15920.457
NyuWa32110.535345115038
Ribosome ProfilingSRR2818787;SRR3208885;SRR3208921;SRR5047770;SRR5350740;SRR5990809;SRR5990810;SRR5990811;SRR6838651;SRR8310197;SRR8310201;SRR8310198;SRR8310199;SRR8310200;SRR8310205;SRR810100;SRR810101;SRR1795427

5'UTR Effect
Variant TypeuAUG_gained
GeneGFRA1
ContextAGCGTGC
Kozak SequenceTGCATGC
Kozak Strengthweak
Effectout-of-frame_oORF
Distance to CDS79
Distance to Inframe MetNA
Distance to Alt Stop.