Specific Information of Small Protein : SPROHSA83869
General Information
Small Protein IDSPROHSA83869
OrganismHuman (Homo sapiens)
Small Protein SequenceRERSFHQVDWFLCGRPPPFPPGQHLVVAGGVSELSERIRLILWEN*
RNA SequenceAGGGAACGGAGTTTTCATCAGGTAGATTGGTTTTTGTGCGGCCGTCCTCCACCGTTTCCTCCAGGACAGCACCTAGTCGTGGCCGGAGGAGTCTCAGAGCTGTCAGAAAGAATAAGACTGATTTTATGGGAAAATTAA
Protein Length45
Start CodonAGG
Locationchr14:58291679-58298064:-
Blocks58291679-58291707,58297954-58298064
Mean PhyloCSF-7.95634779032
Data SourceRibosome profiling;
Related GenesENSG00000139971; ARMH4; ENSG00000257621; PSMA3-AS1; ENSG00000252782; RNU6-341P; NONHSAG015097;NONHSAG015108;
Mass (Da)mono. 5223.7; avg. 5226.9
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE45833_1_altENSG00000257621.8ENST00000556002.5PSMA3-AS1LncRNANovel0.011283None381761719.2518041
GSE103308_altENSG00000257621.8ENST00000556002.5PSMA3-AS1LncRNANovel0.000638None381763522.5601156
SRR6838651_altENSG00000257621.8ENST00000556002.5PSMA3-AS1LncRNANovel0.035423None38176365.1115849
SRR618770,618771,618772,618773_altENSG00000257621.8ENST00000556002.5PSMA3-AS1LncRNANovel9.061E-050.0140938176113138.234537
SRR964946_altENSG00000257621.8ENST00000556002.5PSMA3-AS1LncRNANovel0.0197267.469E-0538176NANA
GSE45833_1_altENSG00000257621.8ENST00000556400.5PSMA3-AS1LncRNANovel0.011283None511891719.2518041
GSE103308_altENSG00000257621.8ENST00000556400.5PSMA3-AS1LncRNANovel0.000638None511893522.5601156
SRR6838651_altENSG00000257621.8ENST00000556400.5PSMA3-AS1LncRNANovel0.035423None51189365.1115849
SRR618770,618771,618772,618773_altENSG00000257621.8ENST00000556400.5PSMA3-AS1LncRNANovel9.061E-050.03593551189113138.234537
SRR964946_altENSG00000257621.8ENST00000556400.5PSMA3-AS1LncRNANovel0.0197260.00049351189NANA
GSE45833_1_altENSG00000257621.8ENST00000555275.5PSMA3-AS1LncRNANovel0.011283None581961719.2518041
GSE103308_altENSG00000257621.8ENST00000555275.5PSMA3-AS1LncRNANovel0.000638None581963522.5601156
SRR6838651_altENSG00000257621.8ENST00000555275.5PSMA3-AS1LncRNANovel0.035423None58196365.1115849
SRR618770,618771,618772,618773_altENSG00000257621.8ENST00000555275.5PSMA3-AS1LncRNANovel9.061E-050.03593558196113138.234537
SRR964946_altENSG00000257621.8ENST00000555275.5PSMA3-AS1LncRNANovel0.0197267.469E-0558196NANA
GSE45833_1_altENSG00000257621.8ENST00000554360.5PSMA3-AS1LncRNANovel0.011283None652031719.2518041
GSE45833_1_altENSG00000257621.8ENST00000555707.5PSMA3-AS1LncRNANovel0.011283None652031719.2518041
GSE103308_altENSG00000257621.8ENST00000554360.5PSMA3-AS1LncRNANovel0.000638None652033522.5601156
GSE103308_altENSG00000257621.8ENST00000555707.5PSMA3-AS1LncRNANovel0.000638None652033522.5601156
SRR6838651_altENSG00000257621.8ENST00000554360.5PSMA3-AS1LncRNANovel0.035423None65203365.1115849
SRR6838651_altENSG00000257621.8ENST00000555707.5PSMA3-AS1LncRNANovel0.035423None65203365.1115849
SRR618770,618771,618772,618773_altENSG00000257621.8ENST00000554360.5PSMA3-AS1LncRNANovel9.061E-050.00448165203113138.234537
SRR618770,618771,618772,618773_altENSG00000257621.8ENST00000555707.5PSMA3-AS1LncRNANovel9.061E-050.00448165203113138.234537
SRR964946_altENSG00000257621.8ENST00000554360.5PSMA3-AS1LncRNANovel0.0197263.315E-0665203NANA
SRR964946_altENSG00000257621.8ENST00000555707.5PSMA3-AS1LncRNANovel0.0197263.315E-0665203NANA
GSE45833_1_altENSG00000257621.8ENST00000554378.5PSMA3-AS1LncRNANovel0.011283None702081719.2518041
GSE103308_altENSG00000257621.8ENST00000554378.5PSMA3-AS1LncRNANovel0.000638None702083522.5601156
SRR6838651_altENSG00000257621.8ENST00000554378.5PSMA3-AS1LncRNANovel0.035423None70208365.1115849
SRR618770,618771,618772,618773_altENSG00000257621.8ENST00000554378.5PSMA3-AS1LncRNANovel9.061E-050.03593570208113138.234537
SRR964946_altENSG00000257621.8ENST00000554378.5PSMA3-AS1LncRNANovel0.0197260.00049370208NANA
GSE45833_1_altENSG00000139971.15ENST00000554218.1ARMH4Protein_codingNovel0.011283None752131719.2518041
GSE103308_altENSG00000139971.15ENST00000554218.1ARMH4Protein_codingNovel0.000638None752133522.5601156
SRR6838651_altENSG00000139971.15ENST00000554218.1ARMH4Protein_codingNovel0.035423None75213365.1115849
SRR964946_altENSG00000139971.15ENST00000554218.1ARMH4Protein_codingNovel0.0197260.00049375213NANA
Min Ribo P value9.061E-05
Min TIS P value3.315E-06
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE103308_altRD-muscleWTGSM276024729696588;
GSE45833_1_altBJ cellsProliferationGSM1047584; GSM104758523594524;
SRR618770,618771,618772,618773_altHEK293WTSRR618770; SRR618771; SRR618772; SRR618773NA;
SRR6838651_altMCF7Breast adenocarcinomaGSM304296430102689;
SRR964946_altHEK293WTSRR96494622927429;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA2486295ATT-58291679-58291697
SPROHSA2625856CTG-58291679-58291700
SPROHSA34939819GTG-58291679-58291707, 58297954-58297986
SPROHSA39116834TTG-58291679-58291707, 58297954-58298031
SPROHSA29539348CTG-58291679-58291707, 58297954-58298073
SPROHSA22566650ATG-58291679-58291707, 58297954-58298079
SPROHSA34950058GTG-58291679-58291707, 58297954-58298103