Specific Information of Small Protein : SPROHSA55874
General Information
Small Protein IDSPROHSA55874
OrganismHuman (Homo sapiens)
Small Protein SequenceTADAGGLGRQFVFSFFIKIIFPACCWIWGNFLFVFYDLYLTERNPLKTSA*
RNA SequenceACGGCGGACGCCGGAGGATTGGGGCGGCAATTTGTCTTTTCCTTTTTTATTAAAATTATTTTTCCTGCCTGTTGTTGGATTTGGGGAAATTTTTTGTTTGTTTTTTATGATTTGTATTTGACTGAGAGAAACCCACTGAAGACGTCTGCGTGA
Protein Length50
Start CodonACG
Locationchr12:46372525-46372678:-
Blocks46372525-46372678
Mean PhyloCSF-6.53803924096
Data SourceRibosome profiling;
Related GenesENSG00000134294; SLC38A2; ENSG00000258096; AC025031.2; NONHSAG010985;NONHSAG010986;
Mass (Da)mono. 5781.9; avg. 5785.7
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR3208885_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.036704None9324689104.508766
SRR4045276_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.000398None93246240371.515375
GSE45833_6_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.001875None93246355396.469806
GSE45833_5_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.005949None93246270680.172643
GSE45785_1_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.009175None93246202865.563578
GSE45785_4_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.013291None932462561067.14931
GSE45785_3_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR4.875E-05None93246354975.801753
GSE89183_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.049003None932461571.5130303
SRR5047770_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.00368None9324615278.8216308
GSE104033_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.007731None9324668224.826045
SRR6838651_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.010365None9324613254.488417
GSE83493_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.00224None93246271212.266976
SRR5350744_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.010237None9324684213.646590
SRR5350745_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.013005None9324698376.598724
SRR618770,618771,618772,618773_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR1.501E-060.0069793246337371.839633
GSE97140_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.007731None9324668224.799776
SRR3208885_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.036704None9524889104.508766
SRR3208885_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.036704None9524889104.508766
SRR4045276_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.000398None95248240371.515375
GSE45833_6_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.001875None95248355396.469806
GSE45833_5_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.005949None95248270680.172643
GSE45785_1_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.009175None95248202865.563578
GSE45785_4_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.013291None952482561067.14931
GSE45785_3_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR4.875E-05None95248354975.801753
SRR4045276_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.000398None95248240371.515375
GSE45833_6_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.001875None95248355396.469806
GSE45833_5_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.005949None95248270680.172643
GSE45785_1_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.009175None95248202865.563578
GSE45785_4_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.013291None952482561067.14931
GSE45785_3_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel4.875E-05None95248354975.801753
GSE89183_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.049003None952481571.5130303
GSE89183_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.049003None952481571.5130303
SRR5047770_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.00368None9524815278.8216308
SRR5047770_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.00368None9524815278.8216308
GSE104033_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.007731None9524868224.826045
GSE104033_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.007731None9524868224.826045
SRR6838651_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.010365None9524813254.488417
SRR6838651_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.010365None9524813254.488417
GSE83493_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.00224None95248271212.266976
GSE83493_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.00224None95248271212.266976
SRR5350744_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.010237None9524884213.646590
SRR5350744_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.010237None9524884213.646590
SRR5350745_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.013005None9524898376.598724
SRR5350745_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.013005None9524898376.598724
SRR618770,618771,618772,618773_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR1.501E-060.0069795248337371.839633
GSE97140_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.007731None9524868224.799776
GSE97140_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.007731None9524868224.799776
Min Ribo P value1.501E-06
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE104033_altHAP-1 cellsChronic myeloid leukemiaGSM2788007; GSM278800830143613;
GSE45785_1_altBJ cellsWTGSM111520423594524;
GSE45785_3_altBJ cellsImmortalizedGSM111521023594524;
GSE45785_4_altBJ cellsImmortalizedGSM111521323594524;
GSE45833_5_altBJ cellsSenescenceGSM104759023594524;
GSE45833_6_altBJ cellsTransformedGSM104759123594524;
GSE83493_altHeLa S3Cervical cancerGSM2204389; GSM2204390; GSM2204391; GSM220439228460002;
GSE89183_altCD34+ hematopoietic cells-ErythroidWTGSM2360179; GSM236018029551269;
GSE97140_altFlp-In T-REx-293WTGSM2552194; GSM255219528520920;
SRR3208885_altES cell-derived neurons TSC2+/+WTGSM208253727655340;
SRR4045276_altMeg01 cellsWTGSM228590927681415;
SRR5047770_altiPSC-differentiated dopamine neuronsParkinson DiseaseGSM2402496; GSM2402497; GSM2402498NA;
SRR5350744_altPC9NSCLCGSM253890328388414;
SRR5350745_altH1933NSCLCGSM253890428388414;
SRR618770,618771,618772,618773_altHEK293WTSRR618770; SRR618771; SRR618772; SRR618773NA;
SRR6838651_altMCF7Breast adenocarcinomaGSM304296430102689;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA2520675CTG-46372525-46372543
SPROHSA37031511TTG-46372525-46372561
SPROHSA24772224ATT-46372525-46372600
SPROHSA24951931ATT-46372525-46372621
SPROHSA23005232ATT-46372525-46372624
SPROHSA27707968CTG-46372525-46372732