Specific Information of Small Protein : SPROMMU77466
General Information
Small Protein ID | SPROMMU77466 |
Organism | Mouse (Mus musculus) |
Small Protein Sequence | IYDNFGIVEGLIAMVYAITATQKTVDGPSGKLWRDGCGATQNIIPASTGAAKTWGKAIPELNGHGLPCSYPRCIRCI* |
RNA Sequence | ATCTATGACAACTTTGGCATTGTGGAAGGGCTCATAGCCATGGTCTATGCTATCACTGCCACTCAGAAGACTGTGGATGGCCCCTCTGGAAAGCTGTGGCGTGATGGCTGTGGGGCTACCCAGAACATCATCCCTGCATCCACTGGTGCTGCCAAGACTTGGGGCAAGGCCATCCCAGAGCTGAACGGGCATGGCCTTCCATGTTCCTACCCCCGTTGTATCCGTTGTATCTGA |
Protein Length | 77 |
Start Codon | ATC |
Location | chr1:11223793-11224027:- |
Blocks | 11223793-11224027 |
Mean PhyloCSF | -0.0931666692098 |
Data Source | Ribosome profiling; |
Related Genes | ENSMUSG00000048960; Prex2; ENSMUSG00000101827; Gm28686; NONMMUG000100; |
Mass (Da) | mono. 8147.1; avg. 8152.3 |
Ribosome profiling
Min Ribo P value | 0.036086 |
Min TIS P value | None |
Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
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GSE89011_alt | RF8-embryonic stem cell | WT | GSM2357212; GSM2357214 | 28003464; |
Mass Spectrometry Information
Function and Disease
Functional domain prediction |       |
Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
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No results |
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