Specific Information of Small Protein : SPROHSA303833
General Information
| Small Protein ID | SPROHSA303833 |
| Organism | Human (Homo sapiens) |
| Small Protein Sequence | LGRGSLIPLVLVKKKSIPSGMACPEDSQIHPSNRLHCRRQSGFILYSPCRLPSS* |
| RNA Sequence | CTGGGGCGTGGGTCTCTCATCCCTCTCGTCCTGGTGAAGAAGAAGAGTATACCCAGCGGAATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACTTCACTGCAGGAGACAGAGTGGATTCATCCTGTATTCTCCATGTAGACTTCCATCTTCATGA |
| Protein Length | 54 |
| Start Codon | CTG |
| Location | chr10:95876554-95907721:- |
| Blocks | 95876554-95876660,95907662-95907721 |
| Mean PhyloCSF | -7.87712730639 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSG00000138185; ENTPD1; ENSG00000226688; ENTPD1-AS1; ENSG00000188649; CC2D2B; ENSG00000270099; AL365273.2; NONHSAG061460;NONHSAG006591; |
| Mass (Da) | mono. 5928.1; avg. 5931.9 |
Ribosome profiling
| Min Ribo P value | 0.035783 |
| Min TIS P value | 0.007775 |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| SRR964946_alt | HEK293 | WT | SRR964946 | 22927429; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| No results |
| Disease | Detected |
|---|
| No results |
Related Variants
| Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
|---|
| No results |
Related Small Proteins with Different TISs
SmProt