Specific Information of Small Protein : SPROHSA301125
General Information
Small Protein IDSPROHSA301125
OrganismHuman (Homo sapiens)
Small Protein SequenceLGQPPVKRRRSVMPLEDWMNILQEPDEGGHAG*
RNA SequenceCTGGGCCAGCCACCTGTCAAGAGGAGGCGGAGCGTCATGCCTCTGGAAGACTGGATGAATATTCTCCAGGAGCCTGACGAAGGCGGCCATGCTGGATAA
Protein Length32
Start CodonCTG
Locationchr9:120843355-120847308:+
Blocks120843355-120843439,120847293-120847308
Mean PhyloCSF-6.96069698984
Data SourceRibosome profiling;
Related GenesENSG00000226752; CUTALP; NONHSAG053338;
Mass (Da)mono. 3611.8; avg. 3614.1
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR5047770_altENSG00000226752.9ENST00000640391.1CUTALPTranscribed_unitary_pseudogeneNovel0.025974None36045975.60991272
Min Ribo P value0.025974
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
SRR5047770_altiPSC-differentiated dopamine neuronsParkinson DiseaseGSM2402496; GSM2402497; GSM2402498NA;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA17005120ATG+120843391-120843439, 120847293-120847308
SPROHSA8049024AGG+120843379-120843439, 120847293-120847308
SPROHSA37200634TTG+120843349-120843439, 120847293-120847308
SPROHSA5533751ACG+120843298-120843439, 120847293-120847308
SPROHSA18723857ATG+120843280-120843439, 120847293-120847308