Specific Information of Small Protein : SPROHSA246484
General Information
| Small Protein ID | SPROHSA246484 |
| Organism | Human (Homo sapiens) |
| Small Protein Sequence | ISYKPHQRRLKMKKLPSPYITNLCCAPTRTCFKFPWQFTTPILYQARL |
| RNA Sequence | ATTTCGTATAAGCCACATCAGAGACGACTGAAGATGAAAAAACTACCATCCCCGTATATAACTAATTTGTGCTGTGCACCAACAAGAACCTGCTTTAAATTTCCATGGCAATTTACAACCCCCATACTGTACCAGGCAAGGTTA |
| Protein Length | 48 |
| Start Codon | ATT |
| Location | chr14:58285586-58285730:- |
| Blocks | 58285586-58285730 |
| Mean PhyloCSF | 0 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSG00000139971; ARMH4; ENSG00000257621; PSMA3-AS1; NONHSAG015097;NONHSAG015108; |
| Mass (Da) | mono. 5783.1; avg. 5786.9 |
Ribosome profiling
| Min Ribo P value | 8.409E-05 |
| Min TIS P value | None |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| GSE105082_alt | HELA | Cervical cancer | GSM2817679; GSM2817680 | 30591072; |
| SRR964946_alt | HEK293 | WT | SRR964946 | 22927429; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| No results |
| Disease | Detected |
|---|
| No results |
Related Variants
| Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
|---|
| No results |
Related Small Proteins with Different TISs
SmProt