Specific Information of Small Protein : SPROHSA230009
General Information
Small Protein IDSPROHSA230009
OrganismHuman (Homo sapiens)
Small Protein SequenceIISYKPHQRRLKMKKLPSPYITNLCCAPTRTCFKFPWQFTTPILYQARL
RNA SequenceATTATTTCGTATAAGCCACATCAGAGACGACTGAAGATGAAAAAACTACCATCCCCGTATATAACTAATTTGTGCTGTGCACCAACAAGAACCTGCTTTAAATTTCCATGGCAATTTACAACCCCCATACTGTACCAGGCAAGGTTA
Protein Length49
Start CodonATT
Locationchr14:58285586-58285733:-
Blocks58285586-58285733
Mean PhyloCSF0
Data SourceRibosome profiling;
Related GenesENSG00000139971; ARMH4; ENSG00000257621; PSMA3-AS1; NONHSAG015097;NONHSAG015108;
Mass (Da)mono. 5896.2; avg. 5900.1
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR618770,618771,618772,618773_altENSG00000257621.8ENST00000557412.1PSMA3-AS1LncRNANovel0.0052870.025107407554910.3357592
Min Ribo P value0.005287
Min TIS P value0.025107
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
SRR618770,618771,618772,618773_altHEK293WTSRR618770; SRR618771; SRR618772; SRR618773NA;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA13620437ATG-58285586-58285697
SPROHSA25226239CTG-58285586-58285703
SPROHSA1751445AAG-58285586-58285721
SPROHSA24648448ATT-58285586-58285730