Specific Information of Small Protein : SPROHSA136204
General Information
Small Protein IDSPROHSA136204
OrganismHuman (Homo sapiens)
Small Protein SequenceMKKLPSPYITNLCCAPTRTCFKFPWQFTTPILYQARL
RNA SequenceATGAAAAAACTACCATCCCCGTATATAACTAATTTGTGCTGTGCACCAACAAGAACCTGCTTTAAATTTCCATGGCAATTTACAACCCCCATACTGTACCAGGCAAGGTTA
Protein Length37
Start CodonATG
Locationchr14:58285586-58285697:-
Blocks58285586-58285697
Mean PhyloCSF0
Data SourceRibosome profiling;
Related GenesENSG00000139971; ARMH4; ENSG00000257621; PSMA3-AS1; NONHSAG015097;NONHSAG015108;
Mass (Da)mono. 4376.2; avg. 4379.2
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR4045276ENSG00000257621.8ENST00000557412.1PSMA3-AS1LncRNANovel0.011028None443554510.6685158
GSE105082ENSG00000257621.8ENST00000557412.1PSMA3-AS1LncRNANovel0.001027None443554106.12205652
GSE83493ENSG00000257621.8ENST00000557412.1PSMA3-AS1LncRNANovel0.011028None44355444.31858613
GSE83493_altENSG00000257621.8ENST00000557412.1PSMA3-AS1LncRNANovel0.011028None44355444.31858613
SRR618770,618771,618772,618773_altENSG00000257621.8ENST00000557412.1PSMA3-AS1LncRNANovel0.0301290.002859443554710.6461423
Min Ribo P value0.001027
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE105082HELACervical cancerGSM2817679; GSM281768030591072;
GSE83493HeLa S3Cervical cancerGSM2204389; GSM2204390; GSM2204391; GSM220439228460002;
GSE83493_altHeLa S3Cervical cancerGSM2204389; GSM2204390; GSM2204391; GSM220439228460002;
SRR4045276Meg01 cellsWTGSM228590927681415;
SRR618770,618771,618772,618773_altHEK293WTSRR618770; SRR618771; SRR618772; SRR618773NA;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA25226239CTG-58285586-58285703
SPROHSA1751445AAG-58285586-58285721
SPROHSA24648448ATT-58285586-58285730
SPROHSA23000949ATT-58285586-58285733