Specific Information of Small Protein : SPROHSA222283
General Information
| Small Protein ID | SPROHSA222283 |
| Organism | Human (Homo sapiens) |
| Small Protein Sequence | MLEKRFPNIKVIESGVKQLKSEEHCIVTEDGNQHVYKKLCVLELNQS* |
| RNA Sequence | ATGTTAGAAAAACGCTTTCCCAACATCAAGGTTATAGAATCTGGCGTAAAGCAACTGAAGAGTGAAGAACACTGCATTGTAACAGAAGATGGCAATCAGCATGTATATAAGAAACTCTGTGTGCTGGAGCTAAACCAAAGTTGA |
| Protein Length | 47 |
| Start Codon | ATG |
| Location | chr11:106827533-106827677:- |
| Blocks | 106827533-106827677 |
| Mean PhyloCSF | 0 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSG00000152402; GUCY1A2; ENSG00000213252; AP001282.1; |
| Mass (Da) | mono. 5452.8; avg. 5456.3 |
Ribosome profiling
| Min Ribo P value | 0.034627 |
| Min TIS P value | None |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| SRR5047770 | iPSC-differentiated dopamine neurons | Parkinson Disease | GSM2402496; GSM2402497; GSM2402498 | NA; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| No results |
| Disease | Detected |
|---|
| No results |
Related Variants
| Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
|---|
| No results |
Related Small Proteins with Different TISs
SmProt