Specific Information of Small Protein : SPROHSA11576
General Information
| Small Protein ID | SPROHSA11576 |
| Organism | Human (Homo sapiens) |
| Small Protein Sequence | KSEEHCIVTEDGNQHVYKKLCVLELNQS* |
| RNA Sequence | AAGAGTGAAGAACACTGCATTGTAACAGAAGATGGCAATCAGCATGTATATAAGAAACTCTGTGTGCTGGAGCTAAACCAAAGTTGA |
| Protein Length | 28 |
| Start Codon | AAG |
| Location | chr11:106827533-106827620:- |
| Blocks | 106827533-106827620 |
| Mean PhyloCSF | 0 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSG00000152402; GUCY1A2; ENSG00000213252; AP001282.1; |
| Mass (Da) | mono. 3242.6; avg. 3244.6 |
Ribosome profiling
| Min Ribo P value | 0.033039 |
| Min TIS P value | None |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| SRR5047770_alt | iPSC-differentiated dopamine neurons | Parkinson Disease | GSM2402496; GSM2402497; GSM2402498 | NA; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| No results |
| Disease | Detected |
|---|
| No results |
Related Variants
| Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
|---|
| No results |
Related Small Proteins with Different TISs
SmProt