Specific Information of Small Protein : SPROHSA146469
General Information
Small Protein IDSPROHSA146469
OrganismHuman (Homo sapiens)
Small Protein SequenceMTVFALRGEGMCDHFQRLTCIPQIVWMSYNLNLQTQYSQTLGSDSLQASCTSPRKRACFPLDM*
RNA SequenceATGACAGTGTTCGCTCTAAGGGGAGAAGGAATGTGTGACCATTTCCAACGGTTAACTTGCATTCCCCAGATAGTTTGGATGAGTTACAACCTAAATCTGCAAACTCAATACAGCCAGACCCTGGGAAGTGACTCTCTCCAAGCCTCCTGTACAAGTCCCAGGAAAAGAGCCTGTTTTCCCTTGGACATGTGA
Protein Length63
Start CodonATG
LocationchrX:46545577-46546607:+
Blocks46545577-46545627,46546465-46546607
Mean PhyloCSF-8.3360208571
Data SourceRibosome profiling;
Related GenesENSG00000230844; ZNF674-AS1; NONHSAG054360;
Mass (Da)mono. 7186.4; avg. 7191.3
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE45833_2ENSG00000230844.3ENST00000657382.1ZNF674-AS1LncRNANovel0.035878None14033232.14563543
GSE94454ENSG00000230844.3ENST00000657382.1ZNF674-AS1LncRNANovel0.000252None140332276.26001853
GSE94454_altENSG00000230844.3ENST00000657382.1ZNF674-AS1LncRNANovel0.000252None140332276.26001853
GSE58207_altENSG00000230844.3ENST00000657382.1ZNF674-AS1LncRNANovel0.0007310.0039141403323920.9191361
SRR5047770ENSG00000230844.3ENST00000657382.1ZNF674-AS1LncRNANovel4.41E-05None140332239.50429410
SRR5047770_altENSG00000230844.3ENST00000657382.1ZNF674-AS1LncRNANovel4.41E-05None140332239.50429410
GSE104033ENSG00000230844.3ENST00000657382.1ZNF674-AS1LncRNANovel0.005597None1403321026.3468021
SRR618770,618771,618772,618773_altENSG00000230844.3ENST00000657382.1ZNF674-AS1LncRNANovel1.812E-051.75E-061403322219.3436604
GSE97140ENSG00000230844.3ENST00000657382.1ZNF674-AS1LncRNANovel0.005597None1403321026.3437238
GSE45833_2ENSG00000230844.3ENST00000421685.2ZNF674-AS1LncRNANovel0.035878None8527732.14563543
GSE94454ENSG00000230844.3ENST00000421685.2ZNF674-AS1LncRNANovel0.000252None85277276.26001853
GSE94454_altENSG00000230844.3ENST00000421685.2ZNF674-AS1LncRNANovel0.000252None85277276.26001853
GSE58207_altENSG00000230844.3ENST00000421685.2ZNF674-AS1LncRNANovel0.0007310.003914852773920.9191361
SRR5047770ENSG00000230844.3ENST00000421685.2ZNF674-AS1LncRNANovel4.41E-05None85277239.50429410
SRR5047770_altENSG00000230844.3ENST00000421685.2ZNF674-AS1LncRNANovel4.41E-05None85277239.50429410
GSE104033ENSG00000230844.3ENST00000421685.2ZNF674-AS1LncRNANovel0.005597None852771026.3468021
SRR618770,618771,618772,618773_altENSG00000230844.3ENST00000421685.2ZNF674-AS1LncRNANovel1.812E-051.75E-06852772219.3436604
GSE97140ENSG00000230844.3ENST00000421685.2ZNF674-AS1LncRNANovel0.005597None852771026.3437238
Min Ribo P value1.812E-05
Min TIS P value1.75E-06
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE104033HAP-1 cellsChronic myeloid leukemiaGSM2788007; GSM278800830143613;
GSE45833_2BJ cellsQuiescenceGSM1047586; GSM104758723594524;
GSE58207_altHCT116Colorectal carcinomaGSM1403307; GSM140330825510491;
GSE94454Huh7HepatomaGSM2476003; GSM2476004; GSM247600528323820;
GSE94454_altHuh7HepatomaGSM2476003; GSM2476004; GSM247600528323820;
GSE97140Flp-In T-REx-293WTGSM2552194; GSM255219528520920;
SRR5047770iPSC-differentiated dopamine neuronsParkinson DiseaseGSM2402496; GSM2402497; GSM2402498NA;
SRR5047770_altiPSC-differentiated dopamine neuronsParkinson DiseaseGSM2402496; GSM2402497; GSM2402498NA;
SRR618770,618771,618772,618773_altHEK293WTSRR618770; SRR618771; SRR618772; SRR618773NA;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA15623137ATG+46546493-46546607
SPROHSA10747940ATA+46546484-46546607
SPROHSA22122753ATG+46545607-46545627, 46546465-46546607
SPROHSA36600561GTG+46545583-46545627, 46546465-46546607
SPROHSA35936265GTG+46545571-46545627, 46546465-46546607
SPROHSA21992274ATG+46545544-46545627, 46546465-46546607
SPROHSA3294183AAG+46545517-46545627, 46546465-46546607