Specific Information of Small Protein : SPROHSA107479
General Information
| Small Protein ID | SPROHSA107479 |
| Organism | Human (Homo sapiens) |
| Small Protein Sequence | IVWMSYNLNLQTQYSQTLGSDSLQASCTSPRKRACFPLDM* |
| RNA Sequence | ATAGTTTGGATGAGTTACAACCTAAATCTGCAAACTCAATACAGCCAGACCCTGGGAAGTGACTCTCTCCAAGCCTCCTGTACAAGTCCCAGGAAAAGAGCCTGTTTTCCCTTGGACATGTGA |
| Protein Length | 40 |
| Start Codon | ATA |
| Location | chrX:46546484-46546607:+ |
| Blocks | 46546484-46546607 |
| Mean PhyloCSF | -8.12253660109 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSG00000230844; ZNF674-AS1; NONHSAG054360; |
| Mass (Da) | mono. 4552.2; avg. 4555.2 |
Ribosome profiling
| Min Ribo P value | 0.000556 |
| Min TIS P value | None |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| GSE103308_alt | RD-muscle | WT | GSM2760247 | 29696588; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| No results |
| Disease | Detected |
|---|
| No results |
Related Variants
| Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
|---|
| No results |
Related Small Proteins with Different TISs
SmProt