Specific Information of Small Protein : SPROHSA338823
General Information
Small Protein IDSPROHSA338823
OrganismHuman (Homo sapiens)
Small Protein SequenceVLPKLYLKLHYCLSCAIHSKVVRNRSCEAHKD*
RNA SequenceGTGCTTCCCAAGCTGTATTTGAAGCTACATTACTGTCTGAGTTGTGCAATTCACAGCAAAGTAGTCAGGAATCGATCTTGTGAAGCCCACAAGGACTGA
Protein Length32
Start CodonGTG
Locationchr9:95123706-95123805:+
Blocks95123706-95123805
Mean PhyloCSF0
Data SourceRibosome profiling;
Related GenesENSG00000158169; FANCC; ENSG00000223849; AL354893.1; NONHSAG052920;NONHSAG101513;
Mass (Da)mono. 3723; avg. 3725.4
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE94454_altENSG00000223849.1ENST00000433735.1AL354893.1Processed_pseudogeneNovel0.01087None18628552.24826703
Min Ribo P value0.01087
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE94454_altHuh7HepatomaGSM2476003; GSM2476004; GSM247600528323820;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA31008928CTG+95123718-95123805
SPROHSA24676242ATT+95123676-95123805
SPROHSA13619193ATG+95123523-95123805