Specific Information of Small Protein : SPROHSA246762
General Information
Small Protein IDSPROHSA246762
OrganismHuman (Homo sapiens)
Small Protein SequenceISEASVFDAYVLPKLYLKLHYCLSCAIHSKVVRNRSCEAHKD*
RNA SequenceATTTCTGAAGCGAGCGTCTTTGATGCCTATGTGCTTCCCAAGCTGTATTTGAAGCTACATTACTGTCTGAGTTGTGCAATTCACAGCAAAGTAGTCAGGAATCGATCTTGTGAAGCCCACAAGGACTGA
Protein Length42
Start CodonATT
Locationchr9:95123676-95123805:+
Blocks95123676-95123805
Mean PhyloCSF0
Data SourceRibosome profiling;
Related GenesENSG00000158169; FANCC; ENSG00000223849; AL354893.1; NONHSAG052920;NONHSAG101513;
Mass (Da)mono. 4805.5; avg. 4808.6
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE83493_altENSG00000223849.1ENST00000433735.1AL354893.1Processed_pseudogeneNovel0.029595None1562851917.6509654
Min Ribo P value0.029595
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE83493_altHeLa S3Cervical cancerGSM2204389; GSM2204390; GSM2204391; GSM220439228460002;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA31008928CTG+95123718-95123805
SPROHSA33882332GTG+95123706-95123805
SPROHSA13619193ATG+95123523-95123805