Specific Information of Small Protein : SPROHSA310089
General Information
Small Protein IDSPROHSA310089
OrganismHuman (Homo sapiens)
Small Protein SequenceLYLKLHYCLSCAIHSKVVRNRSCEAHKD*
RNA SequenceCTGTATTTGAAGCTACATTACTGTCTGAGTTGTGCAATTCACAGCAAAGTAGTCAGGAATCGATCTTGTGAAGCCCACAAGGACTGA
Protein Length28
Start CodonCTG
Locationchr9:95123718-95123805:+
Blocks95123718-95123805
Mean PhyloCSF0
Data SourceRibosome profiling;
Related GenesENSG00000158169; FANCC; ENSG00000223849; AL354893.1; NONHSAG052920;NONHSAG101513;
Mass (Da)mono. 3285.7; avg. 3287.8
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR5350740_altENSG00000223849.1ENST00000433735.1AL354893.1Processed_pseudogeneNovel0.034473None198285312.6727325
Min Ribo P value0.034473
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
SRR5350740_altMCF7Breast adenocarcinomaGSM253888428388414;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA33882332GTG+95123706-95123805
SPROHSA24676242ATT+95123676-95123805
SPROHSA13619193ATG+95123523-95123805