Specific Information of Small Protein : SPROHSA25947
General Information
Small Protein IDSPROHSA25947
OrganismHuman (Homo sapiens)
Small Protein SequenceKDKRSPALLAAPDSSQCLA*
RNA SequenceAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCCAGTGCTTAGCATGA
Protein Length19
Start CodonAAG
Locationchr12:46371289-46371349:-
Blocks46371289-46371349
Mean PhyloCSF-4.47081663013
Data SourceRibosome profiling;
Related GenesENSG00000134294; SLC38A2; NONHSAG010985;NONHSAG010986;
Mass (Da)mono. 1970; avg. 1971.2
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE45833_4_altENSG00000134294.14ENST00000551405.1SLC38A2Protein_codingNovel0.020836None15621631111.630878
GSE45833_4_altENSG00000134294.14ENST00000549258.5SLC38A2Protein_coding5'UTR0.020836None29335331111.630878
GSE45833_4_altENSG00000134294.14ENST00000256689.10SLC38A2Protein_coding5'UTR0.020836None29535531111.630878
GSE45833_4_altENSG00000134294.14ENST00000553252.1SLC38A2Protein_codingNovel0.020836None29535531111.630878
GSE45833_4_altENSG00000134294.14ENST00000547252.5SLC38A2Protein_codingNovel0.020836None8414431111.630878
Min Ribo P value0.020836
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE45833_4_altBJ cellsProliferationGSM104758923594524;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA10471534ATA-46371289-46371379, 46372508-46372523
SPROHSA32473136GTG-46371289-46371379, 46372508-46372529
SPROHSA6107731ACG-46371289-46371379, 46372320-46372326