1. NyuWaT2T
  2. Function
  3. xQTL

This page is for browsing eQTL (expression) and sQTL (splicing) results in the NyuWa T2T resource. Utilizing 1,085 RNA-seq datasets from individuals in the 1000 Genomes Project, we conducted population cohort study on expression regulation and splicing regulation of structural variations based on the T2T genome.

Var Type
Variant

QTL Type
Gene
(eg. CHM13_G0049735)

Overlap with GWAS

Items per page
Total page: 2  
Total amount: 16
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VariantGenexQTLSplice JunctionEffect SizeP-value
20-37359581-STR-8AAAC4CHM13_G0034882 ENSG00000101019 UQCC1eQTL-0.15221.97e-5
20-37359581-STR-8AAAC4CHM13_G0034890 ENSG00000125991 ERGIC3eQTL-0.09381.04e-6
20-37359581-STR-8AAAC4CHM13_G0034892 ENSG00000088340 FER1L4eQTL-0.18539.81e-17
20-37359581-STR-8AAAC4CHM13_G0034895 ENSG00000214078 CPNE1eQTL-0.75834.49e-211
20-37359581-STR-8AAAC4CHM13_G0034900 ENSG00000244005 NFS1eQTL-0.09692.35e-6
20-37359581-STR-8AAAC4CHM13_G0034902 ENSG00000131051 RBM39eQTL--0.07563.88e-8
20-37359581-STR-8AAAC4CHM13_G0034911 ENSG00000171222 SCAND1eQTL-0.1262.35e-27
20-37359581-STR-8AAAC4CHM13_G0034890 ENSG00000125991 ERGIC3sQTL20:37263754-372682280.39681.82e-9
20-37359581-STR-8AAAC4CHM13_G0034895 ENSG00000214078 CPNE1sQTL20:37376319-37379905-0.56971.59e-39
20-37359581-STR-8AAAC4CHM13_G0034896 ENSG00000272897 AL109827.1sQTL20:37376319-37379905-0.56971.59e-39

© 2024, Center for Big Data Research in Health Institute of Biophysics, Chinese Academy of Sciences