Specific Information of Small Protein : SPROHSA719
General Information
Small Protein IDSPROHSA719
Organismhuman (Homo sapiens)
Small Protein SequenceKKHFNYNKIVEHQNLSKKKKKKKKQLMKKKKLLEDDFEVNVSNAWFQAMYTSHLFNVHPSDPNFKKTKAVEKTLEEKAWQREQKKQELTQAIKKKEGQ*
RNA SequenceAAGAAACACTTCAATTACAACAAGATTGTGGAGCACCAGAACCTGAGCaaaaagaagaaaaagaagaaaaagcagctcatgaaaaaaaagaaATTATTAGAGGATGACTTTGAGGTAAATGTTAGCAATGCATGGTTTCAAGCAATGTACACTTCCCACTTGTTCAATGTGCATCCCTCAGATCCCAATTTCAAGAAAACAAAAGCTGTGGAAAAAACCCTTGAGGAGAAAGCCTGGCAAAGAGAACAGAAAAAACAAGAACTTACTCAGGCAATAAAGAAAAAAGAGggccagTGA
Protein Length98
Start CodonAAG
Locationchr8:53973604-53974132:+
Blocks53973604-53973898,53974129-53974132
Mean PhyloCSF0
Data SourceRibosome profiling;
Related GenesENSG00000187735; TCEA1; ENSG00000253667; AC100821.1;
Mass (Da)mono. 11821.4; avg. 11828.6
Ribosome profiling
RiboIDGeneIDTransIDSymbolGeneTypeTISTypeRiboPvalueTISPvalueStartOnTransStopOnTransInFrameCountsRiboRPKM
GSE105082_altENSG00000253667.2ENST00000523153.2AC100821.1processed_pseudogeneNovel0.045514None21042401112.51684546
GSE65778ENSG00000253667.2ENST00000523153.2AC100821.1processed_pseudogeneNovel0.036288None2104240131.77131491
GSE94454_altENSG00000253667.2ENST00000523153.2AC100821.1processed_pseudogeneNovel0.000736None21042401436.44503217
Min Ribo Pvalue0.000736
Min TIS PvalueNone
RiboIDCellORTissuePhenotypeRiboSourcePMID
GSE105082_altHELAcervical cancerGSM2817679;GSM281768030591072;
GSE65778HEK293TWTGSM1606107;GSM160610825719440;
GSE94454_altHuh7hepatomaGSM2476003;GSM2476004;GSM247600528323820;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
PANTHERPTHR122022959.1E-20TIPR039754Pre-rRNA-processing protein Esf1GO:0006364
CoilsCoil936-T
PfamPF08159NUC153 domain46705.6E-8TIPR012580NUC153GO:0005634
DiseaseDetected
No results
Related Variants
VarIDConsequence To sORFrsIDRiboID
8-53973701-T-ANon-Synonymous p.L33I.SRR5382423;SRR6053333;SRR1333393;SRR1795425
Related Small Proteins with Different TISs
IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA13618472atg+53973682-53973898,53974129-53974132
SPROHSA24426590ATT+53973628-53973898,53974129-53974132
SPROHSA1400091AAG+53973625-53973898,53974129-53974132