Specific Information of Small Protein : SPROHSA244265
General Information
Small Protein IDSPROHSA244265
Organismhuman (Homo sapiens)
Small Protein SequenceIVEHQNLSKKKKKKKKQLMKKKKLLEDDFEVNVSNAWFQAMYTSHLFNVHPSDPNFKKTKAVEKTLEEKAWQREQKKQELTQAIKKKEGQ*
RNA SequenceATTGTGGAGCACCAGAACCTGAGCaaaaagaagaaaaagaagaaaaagcagctcatgaaaaaaaagaaATTATTAGAGGATGACTTTGAGGTAAATGTTAGCAATGCATGGTTTCAAGCAATGTACACTTCCCACTTGTTCAATGTGCATCCCTCAGATCCCAATTTCAAGAAAACAAAAGCTGTGGAAAAAACCCTTGAGGAGAAAGCCTGGCAAAGAGAACAGAAAAAACAAGAACTTACTCAGGCAATAAAGAAAAAAGAGggccagTGA
Protein Length90
Start CodonATT
Locationchr8:53973628-53974132:+
Blocks53973628-53973898,53974129-53974132
Mean PhyloCSF0
Data SourceRibosome profiling;
Related GenesENSG00000187735; TCEA1; ENSG00000253667; AC100821.1;
Mass (Da)mono. 10761.8; avg. 10768.4
Ribosome profiling
RiboIDGeneIDTransIDSymbolGeneTypeTISTypeRiboPvalueTISPvalueStartOnTransStopOnTransInFrameCountsRiboRPKM
GSE58207_altENSG00000253667.2ENST00000523153.2AC100821.1processed_pseudogeneNovel0.0357680.0408782128240183.01791989
Min Ribo Pvalue0.035768
Min TIS Pvalue0.040878
RiboIDCellORTissuePhenotypeRiboSourcePMID
GSE58207_altHCT116colorectal carcinomaGSM1403307;GSM140330825510491;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
VarIDConsequence To sORFrsIDRiboID
8-53973701-T-ANon-Synonymous p.L25I.SRR5382423;SRR6053333;SRR1333393;SRR1795425
Related Small Proteins with Different TISs
IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA13618472atg+53973682-53973898,53974129-53974132
SPROHSA1400091AAG+53973625-53973898,53974129-53974132
SPROHSA71998AAG+53973604-53973898,53974129-53974132