Specific Information of Small Protein : SPROHSA65165
General Information
Small Protein IDSPROHSA65165
OrganismHuman (Homo sapiens)
Small Protein SequenceRNTNKLFSRIRLILWEN*
RNA SequenceAGGAATACTAACAAATTATTTTCAAGAATAAGACTGATTTTATGGGAAAATTAA
Protein Length17
Start CodonAGG
Locationchr14:58291679-58293091:-
Blocks58291679-58291707,58293065-58293091
Mean PhyloCSF-8.75549994575
Data SourceRibosome profiling;
Related GenesENSG00000139971; ARMH4; ENSG00000257621; PSMA3-AS1; ENSG00000252782; RNU6-341P; NONHSAG015097;NONHSAG015108;
Mass (Da)mono. 2172.2; avg. 2173.5
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR4045276_altENSG00000257621.8ENST00000553657.5PSMA3-AS1LncRNANovel0.024252None1772311670.1751265
SRR4045276_altENSG00000257621.8ENST00000555037.1PSMA3-AS1LncRNANovel0.024252None2262801670.1751265
Min Ribo P value0.024252
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
SRR4045276_altMeg01 cellsWTGSM228590927681415;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA2486295ATT-58291679-58291697
SPROHSA2625856CTG-58291679-58291700
SPROHSA22531119ATG-58291679-58291707, 58293065-58293097