Specific Information of Small Protein : SPROHSA48485
General Information
Small Protein IDSPROHSA48485
OrganismHuman (Homo sapiens)
Small Protein SequenceTQEARHTQTHTGNKGSGTGSSTLEPTSLSEPPVTGLCLPLDGHVDGAAHPASLVATLPG*
RNA SequenceACGCAGGAAGCAAGACACACCCAGACACACACAGGGAATAAAGGCTCAGGGACCGGCAGTTCTACTCTAGAGCCCACCAGCCTCTCAGAGCCTCCGGTGACTGGCCTGTGTCTCCCCCTGGATGGACATGTGGACGGCGCTGCTCATCCTGCAAGCCTTGTTGCTACCCTCCCTGGCTGA
Protein Length59
Start CodonACG
Locationchr19:11577258-11578057:-
Blocks11577258-11577317,11577592-11577679,11578023-11578057
Mean PhyloCSF-7.12433885601
Data SourceRibosome profiling;
Related GenesENSG00000198551; ZNF627; ENSG00000102575; ACP5;
Mass (Da)mono. 5854.9; avg. 5858.3
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE45785_5_altENSG00000102575.12ENST00000591319.1ACP5Protein_coding5'UTR0.0358None302482423.0211719
Min Ribo P value0.0358
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE45785_5_altBJ cellsImmortalizedGSM111521623594524;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
19-11577645-T-CSynonymous p.L23Lrs2071484SRR5047771; SRR5512738; SRR810104
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA34223316GTG-11577258-11577309
SPROHSA17425163ATG-11577258-11577317, 11577592-11577679, 11578023-11578069