Specific Information of Small Protein : SPROHSA174251
General Information
Small Protein IDSPROHSA174251
OrganismHuman (Homo sapiens)
Small Protein SequenceMLSCTQEARHTQTHTGNKGSGTGSSTLEPTSLSEPPVTGLCLPLDGHVDGAAHPASLVATLPG*
RNA SequenceATGCTCAGCTGCACGCAGGAAGCAAGACACACCCAGACACACACAGGGAATAAAGGCTCAGGGACCGGCAGTTCTACTCTAGAGCCCACCAGCCTCTCAGAGCCTCCGGTGACTGGCCTGTGTCTCCCCCTGGATGGACATGTGGACGGCGCTGCTCATCCTGCAAGCCTTGTTGCTACCCTCCCTGGCTGA
Protein Length63
Start CodonATG
Locationchr19:11577258-11578069:-
Blocks11577258-11577317,11577592-11577679,11578023-11578069
Mean PhyloCSF-7.27022913471
Data SourceRibosome profiling;
Related GenesENSG00000198551; ZNF627; ENSG00000102575; ACP5;
Mass (Da)mono. 6289; avg. 6292.9
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR5512738ENSG00000102575.12ENST00000591319.1ACP5Protein_coding5'UTR0.007026None2904821610.5640737
GSE45785_5ENSG00000102575.12ENST00000591319.1ACP5Protein_coding5'UTR0.035878None290482421.5823487
SRR5047771ENSG00000102575.12ENST00000591319.1ACP5Protein_coding5'UTR0.019464None290482266.19290267
Min Ribo P value0.007026
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE45785_5BJ cellsImmortalizedGSM111521623594524;
SRR5047771iPSC-differentiated dopamine neuronsParkinson DiseaseNANA;
SRR5512738GM19147-Lymphoblastoid Cell LineWTGSM260131229950183;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
MobiDBLitemobidb-liteconsensus disorder prediction133-T
MobiDBLitemobidb-liteconsensus disorder prediction138-T
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
19-11577645-T-CSynonymous p.L27Lrs2071484SRR5047771; SRR5512738; SRR810104
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA34223316GTG-11577258-11577309
SPROHSA4848559ACG-11577258-11577317, 11577592-11577679, 11578023-11578057