Specific Information of Small Protein : SPROHSA316863
General Information
Small Protein IDSPROHSA316863
OrganismHuman (Homo sapiens)
Small Protein SequenceLFAAGVYHPRPSPLPVSV*
RNA SequenceCTGTTCGCCGCCGGGGTCTATCACCCCCGCCCCTCGCCTCTGCCCGTGAGCGTGTGA
Protein Length18
Start CodonCTG
Locationchr10:95907773-95907830:-
Blocks95907773-95907830
Mean PhyloCSF-9.14915790056
Data SourceRibosome profiling;
Related GenesENSG00000226688; ENTPD1-AS1; ENSG00000188649; CC2D2B; ENSG00000270099; AL365273.2; NONHSAG061460;
Mass (Da)mono. 1906; avg. 1907.2
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE58207_altENSG00000226688.7ENST00000414006.2ENTPD1-AS1LncRNANovel0.0169880.00016212691832.5220577
SRR618770,618771,618772,618773_altENSG00000226688.7ENST00000414006.2ENTPD1-AS1LncRNANovel0.0026260.00029112691544.4256316
GSE58207_altENSG00000226688.7ENST00000655193.1ENTPD1-AS1LncRNANovel0.0169880.0001623083651832.5220577
SRR618770,618771,618772,618773_altENSG00000226688.7ENST00000655193.1ENTPD1-AS1LncRNANovel0.0026261.033E-053083651544.4256316
GSE58207_altENSG00000226688.7ENST00000449419.6ENTPD1-AS1LncRNANovel0.0169880.000162601171832.5220577
SRR618770,618771,618772,618773_altENSG00000226688.7ENST00000449419.6ENTPD1-AS1LncRNANovel0.0026260.000291601171544.4256316
GSE58207_altENSG00000226688.7ENST00000665049.1ENTPD1-AS1LncRNANovel0.0169880.000162611181832.5220577
GSE58207_altENSG00000226688.7ENST00000666945.1ENTPD1-AS1LncRNANovel0.0169880.000162611181832.5220577
SRR618770,618771,618772,618773_altENSG00000226688.7ENST00000665049.1ENTPD1-AS1LncRNANovel0.0026261.033E-05611181544.4256316
SRR618770,618771,618772,618773_altENSG00000226688.7ENST00000666945.1ENTPD1-AS1LncRNANovel0.0026261.033E-05611181544.4256316
GSE58207_altENSG00000226688.7ENST00000664887.1ENTPD1-AS1LncRNANovel0.0169880.000162671241832.5220577
SRR618770,618771,618772,618773_altENSG00000226688.7ENST00000664887.1ENTPD1-AS1LncRNANovel0.0026260.000291671241544.4256316
GSE58207_altENSG00000226688.7ENST00000662079.1ENTPD1-AS1LncRNANovel0.0169880.000162711281832.5220577
SRR618770,618771,618772,618773_altENSG00000226688.7ENST00000662079.1ENTPD1-AS1LncRNANovel0.0026261.033E-05711281544.4256316
GSE58207_altENSG00000226688.7ENST00000653870.1ENTPD1-AS1LncRNANovel0.0169880.000162731301832.5220577
GSE58207_altENSG00000226688.7ENST00000657446.1ENTPD1-AS1LncRNANovel0.0169880.000162731301832.5220577
GSE58207_altENSG00000226688.7ENST00000661794.1ENTPD1-AS1LncRNANovel0.0169880.000162731301832.5220577
SRR618770,618771,618772,618773_altENSG00000226688.7ENST00000653870.1ENTPD1-AS1LncRNANovel0.0026260.000291731301544.4256316
SRR618770,618771,618772,618773_altENSG00000226688.7ENST00000657446.1ENTPD1-AS1LncRNANovel0.0026260.000291731301544.4256316
SRR618770,618771,618772,618773_altENSG00000226688.7ENST00000661794.1ENTPD1-AS1LncRNANovel0.0026260.000291731301544.4256316
Min Ribo P value0.002626
Min TIS P value1.033E-05
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE58207_altHCT116Colorectal carcinomaGSM1403307; GSM140330825510491;
SRR618770,618771,618772,618773_altHEK293WTSRR618770; SRR618771; SRR618772; SRR618773NA;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
10-95907825-G-TNon-Synonymous p.F2Lrs41291578SRR1795427; SRR964946; SRR618772; SRR618771; SRR618773
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA2699655CTG-95907773-95907791
SPROHSA13518724ATC-95907773-95907848
SPROHSA29506239CTG-95907773-95907893