SmProt
SmProt
| Small Protein ID | SPROHSA177329 | ||
| Organism | Human (Homo sapiens) | ||
| Small Protein Sequence | MLGRSNLAFLGCISEGKSS* | ||
| RNA Sequence | atgctgggcaggtccaacttggcatttcttggctgtatctctgaaggaaagtcatcttaa | ||
| Protein Length | 19 | ||
| Start Codon | atg | ||
| Location | chr15:40039437-40046009:+ | ||
| Blocks | 40039437-40039448,40045960-40046009 | ||
| Mean PhyloCSF | -8.07886670431 | ||
| Data Source | Ribosome profiling; Literature; | ||
| Related Genes | ENSG00000248508; SRP14-AS1; NONHSAG070257; | ||
| Mass (Da) | mono. 1969; avg. 1970.3 | ||
| Ribo-seq ID | Ensembl Gene ID | Ensembl Transcript ID | Symbol | Gene Type | TIS Type | Ribo P value | TIS P value | Start On Trans | Stop On Trans | In-frame Count | Ribo-seq RPKM |
|---|---|---|---|---|---|---|---|---|---|---|---|
| GSE103308 | ENSG00000248508.8 | ENST00000660446.1 | SRP14-AS1 | LncRNA | Novel | 0.033314 | None | 133 | 193 | 3 | 4.44756564 |
| GSE103308 | ENSG00000248508.8 | ENST00000661955.1 | SRP14-AS1 | LncRNA | Novel | 0.033314 | None | 133 | 193 | 3 | 4.44756564 |
| GSE103308 | ENSG00000248508.8 | ENST00000668306.1 | SRP14-AS1 | LncRNA | Novel | 0.033314 | None | 133 | 193 | 3 | 4.44756564 |
| GSE105082 | ENSG00000248508.8 | ENST00000660446.1 | SRP14-AS1 | LncRNA | Novel | 0.000774 | None | 133 | 193 | 10 | 11.3258045 |
| GSE105082 | ENSG00000248508.8 | ENST00000661955.1 | SRP14-AS1 | LncRNA | Novel | 0.000774 | None | 133 | 193 | 10 | 11.3258045 |
| GSE105082 | ENSG00000248508.8 | ENST00000668306.1 | SRP14-AS1 | LncRNA | Novel | 0.000774 | None | 133 | 193 | 10 | 11.3258045 |
| GSE83493 | ENSG00000248508.8 | ENST00000660446.1 | SRP14-AS1 | LncRNA | Novel | 0.011097 | None | 133 | 193 | 8 | 15.9787686 |
| GSE83493 | ENSG00000248508.8 | ENST00000661955.1 | SRP14-AS1 | LncRNA | Novel | 0.011097 | None | 133 | 193 | 8 | 15.9787686 |
| GSE83493 | ENSG00000248508.8 | ENST00000668306.1 | SRP14-AS1 | LncRNA | Novel | 0.011097 | None | 133 | 193 | 8 | 15.9787686 |
| GSE103308 | ENSG00000248508.8 | ENST00000504245.6 | SRP14-AS1 | LncRNA | Novel | 0.033314 | None | 142 | 202 | 3 | 4.44756564 |
| GSE105082 | ENSG00000248508.8 | ENST00000504245.6 | SRP14-AS1 | LncRNA | Novel | 0.000774 | None | 142 | 202 | 10 | 11.3258045 |
| GSE83493 | ENSG00000248508.8 | ENST00000504245.6 | SRP14-AS1 | LncRNA | Novel | 0.011097 | None | 142 | 202 | 8 | 15.9787686 |
| GSE103308 | ENSG00000248508.8 | ENST00000667323.1 | SRP14-AS1 | LncRNA | Novel | 0.033314 | None | 147 | 207 | 3 | 4.44756564 |
| GSE105082 | ENSG00000248508.8 | ENST00000667323.1 | SRP14-AS1 | LncRNA | Novel | 0.000774 | None | 147 | 207 | 10 | 11.3258045 |
| GSE83493 | ENSG00000248508.8 | ENST00000667323.1 | SRP14-AS1 | LncRNA | Novel | 0.011097 | None | 147 | 207 | 8 | 15.9787686 |
| GSE103308 | ENSG00000248508.8 | ENST00000655221.1 | SRP14-AS1 | LncRNA | Novel | 0.033314 | None | 174 | 234 | 3 | 4.44756564 |
| GSE105082 | ENSG00000248508.8 | ENST00000655221.1 | SRP14-AS1 | LncRNA | Novel | 0.000774 | None | 174 | 234 | 10 | 11.3258045 |
| GSE83493 | ENSG00000248508.8 | ENST00000655221.1 | SRP14-AS1 | LncRNA | Novel | 0.011097 | None | 174 | 234 | 8 | 15.9787686 |
| GSE103308 | ENSG00000248508.8 | ENST00000559012.2 | SRP14-AS1 | LncRNA | Novel | 0.033314 | None | 196 | 256 | 3 | 4.44756564 |
| GSE105082 | ENSG00000248508.8 | ENST00000559012.2 | SRP14-AS1 | LncRNA | Novel | 0.000774 | None | 196 | 256 | 10 | 11.3258045 |
| GSE83493 | ENSG00000248508.8 | ENST00000559012.2 | SRP14-AS1 | LncRNA | Novel | 0.011097 | None | 196 | 256 | 8 | 15.9787686 |
| GSE103308 | ENSG00000248508.8 | ENST00000560341.2 | SRP14-AS1 | LncRNA | Novel | 0.033314 | None | 89 | 149 | 3 | 4.44756564 |
| GSE105082 | ENSG00000248508.8 | ENST00000560341.2 | SRP14-AS1 | LncRNA | Novel | 0.000774 | None | 89 | 149 | 10 | 11.3258045 |
| GSE83493 | ENSG00000248508.8 | ENST00000560341.2 | SRP14-AS1 | LncRNA | Novel | 0.011097 | None | 89 | 149 | 8 | 15.9787686 |
| Min Ribo P value | 0.000774 |
| Min TIS P value | None |
| No results |
| PMID | 31155234; |
| Cell lines Or Tissues | left ventricle |
| Phenotype | WT |
| Gene ID | ENSG00000248508 |
| Transcript ID | ENST00000560341 |
| Symbol | NA |
| ORF Type | sORF |
| Gene Type | lincRNA |
| Throughput | High-throughput Literature Mining |
| Interaction | NA |
| Function Description | NA |
| PMID | 26687005; |
| Cell lines Or Tissues | BJ |
| Phenotype | NULL |
| Gene ID | ENSG00000248508 |
| Transcript ID | ENST00000560341 |
| Symbol | SRP14-AS1 |
| ORF Type | sORF |
| Gene Type | lincRNA |
| Throughput | High-throughput Literature Mining |
| Interaction | NA |
| Function Description | NA |
| No results |
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|---|---|---|---|---|---|---|---|---|---|
| No results | ||||||||||
| Disease | Detected | |
|---|---|---|
| No results | ||
| Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
|---|---|---|---|
| No results | |||
| SmProt ID | Small Protein Length | Start Codon | Strand | Blocks |
|---|---|---|---|---|
| SPROHSA383348 | 13 | ttg | + | 40045967-40046009 |
| SPROHSA300893 | 18 | ctg | + | 40039440-40039448, 40045960-40046009 |
| SPROHSA109571 | 23 | ata | + | 40039425-40039448, 40045960-40046009 |