Detail Information of piRNA: piR-mmu-745

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
11	GSM822760	1	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi +/+
12	GSM822758	10	22121019	Miwi IP	Testes, C57BL/6 P14 Miwi +/+
13	GSM822759	3	22121019	Miwi IP	Testes, C57BL/6 P20 Miwi +/+
14	GSM822761	5	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi +/ADH
15	GSM822762	1	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
32	GSM684625	6	22842725	Miwi CLIP	C57BL/6 adult testis
33	GSM684626	10	22842725	Miwi CLIP	C57BL/6 adult testis
59	GSM319955	1	18922463	small RNA	16.5 dpc testis
66	GSM509275	1	20439430	small RNA	MitoPLD+/+ E16.5 testis
86	N/A	1	22020280	Miwi2 IP	Miwi2DAH_2 E16.5 fetal testis
120	GSM958041	2	22902560	Miwi2 IP	Tdrd1 +/-,E18,testis
225	GSM1528807	4	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	10	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	23	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	10	26588211	small RNA	Adult testes Asb1 ao36(KO)
234	GSM433288	4	26115953	small RNA	18dpp hetero tdrd6 KO testes
235	GSM433289	1	26115953	small RNA	18dpp homo tdrd6 KO testes
236	GSM433290	4	26115953	small RNA	25dpp hetero tdrd6 KO testes
237	GSM433291	4	26115953	small RNA	25dpp homo tdrd6 KO testes
240	GSM433294	1	26115953	small RNA	18.5dpc hetero tdrd1 KO testes
348	GSM3772906	15	32674113	small RNA	E16.5 testes(mixed B6CBAF1/Crl and C57BL/6N; control)
349	GSM3772907	39	32674113	small RNA	E16.5 testes(mixed B6CBAF1/Crl and C57BL/6N; control)
350	GSM3772908	18	32674113	small RNA	E16.5 testes(mixed B6CBAF1/Crl and C57BL/6N; control)
351	GSM3772909	5	32674113	small RNA	E16.5 testes(mixed B6CBAF1/Crl and C57BL/6N; Spocd1-/-)
352	GSM3772910	2	32674113	small RNA	E16.5 testes(mixed B6CBAF1/Crl and C57BL/6N; Spocd1-/-)
353	GSM3772911	3	32674113	small RNA	E16.5 testes(mixed B6CBAF1/Crl and C57BL/6N; Spocd1-/-)
441	GSM1096582	1	23523368	small RNA	Wild Type 10.5 dpp testes
443	GSM1096583	7	23523368	small RNA	Wild Type 12.5 dpp testes
444	GSM1096600	9	23523368	oxidized small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	1	23523368	small RNA	Wild Type 14.5 dpp testes
447	GSM1096585	4	23523368	small RNA	Wild Type 17.5 dpp testes
448	GSM1096602	5	23523368	oxidized small RNA	Wild Type 17.5 dpp testes
449	GSM1096586	5	23523368	small RNA	Wild Type 20.5 dpp testes
450	GSM1096603	6	23523368	oxidized small RNA	Wild Type 20.5 dpp testes
451	GSM1096587	1	23523368	small RNA	Wild Type 6 weeks dpp testes
452	GSM1096604	1	23523368	oxidized small RNA	Wild Type 6 weeks dpp testes

1112 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	5:145499182-145499212:+
Hits not all shown! To search for more loci, you can Run Bowtie here or Blat in UCSC

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	22121019	Journal	Nature. 2011 Nov 27;480(7376):264-7.
Title	Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing.
Authors	Reuter M, Berninger P, Chuma S, Shah H, Hosokawa M, Funaya C, Antony C, Sachidanandam R, Pillai RS.

PubMed	22842725	Journal	Nat Struct Mol Biol. 2012 Aug;19(8):773-81.
Title	Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis.
Authors	Vourekas A, Zheng Q, Alexiou P, Maragkakis M, Kirino Y, Gregory BD, Mourelatos Z.

PubMed	18922463	Journal	Mol Cell. 2008 Sep 26;31(6):785-99.
Title	A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice.
Authors	Aravin AA, Sachidanandam R, Bourc'his D, Schaefer C, Pezic D, Toth KF, Bestor T, Hannon GJ.

PubMed	20439430	Journal	Genes Dev. 2010 May;24(9):887-92.
Title	MVH in piRNA processing and gene silencing of retrotransposons.
Authors	Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Takamatsu K, Chuma S, Kojima-Kita K, Shiromoto Y, Asada N, Toyoda A, Fujiyama A, Totoki Y, Shibata T, Kimura T, Nakatsuji N, Noce T, Sasaki H, Nakano T.

PubMed	22020280	Journal	Nature. 2011 Oct 23;480(7376):259-63.
Title	The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements.
Authors	De Fazio S, Bartonicek N, Di Giacomo M, Abreu-Goodger C, Sankar A, Funaya C, Antony C, Moreira PN, Enright AJ, O'Carroll D.

PubMed	22902560	Journal	Mol Cell. 2012 Sep 28;47(6):970-9.
Title	A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing.
Authors	Xiol J, Cora E, Koglgruber R, Chuma S, Subramanian S, Hosokawa M, Reuter M, Yang Z, Berninger P, Palencia A, Benes V, Penninger J, Sachidanandam R, Pillai RS.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	32674113	Journal	Nature. 2020 Aug;584(7822):635-639. doi: 10.1038/s41586-020-2557-5.
Title	SPOCD1 is an essential executor of piRNA-directed de novo DNA methylation.
Authors	Zoch A, Auchynnikava T, Berrens RV, Kabayama Y, Schöpp T, Heep M, Vasiliauskaitė L, Pérez-Rico YA, Cook AG, Shkumatava A, Rappsilber J, Allshire RC, O'Carroll D.

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.