Detail Information of piRNA: piR-mmu-641

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
11	GSM822760	7	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi +/+
12	GSM822758	5	22121019	Miwi IP	Testes, C57BL/6 P14 Miwi +/+
13	GSM822759	8	22121019	Miwi IP	Testes, C57BL/6 P20 Miwi +/+
14	GSM822761	4	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi +/ADH
16	GSM822763	3	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
52	GSM610967	1	21602304	small RNA	Male germ cell, Round spermatids
116	GSM958037	4	22902560	Mili IP	Fkbp6 +/-,P10,testis
117	GSM958038	1	22902560	Mili IP	Fkbp6 -/-,P10,testis
118	GSM958039	1	22902560	Mili IP	Tdrd1 +/-,E18,testis
120	GSM958041	1	22902560	Miwi2 IP	Tdrd1 +/-,E18,testis
126	GSM466728	13	20059948	Mili IP	Tdrd9+/- 14dpp testis
129	GSM466729	9	20059948	Mili IP	Tdrd9+/- 14dpp testis
130	GSM466730	7	20059948	Mili IP	Tdrd9-/- 14dpp testis
131	GSM466731	3	20059948	Mili IP	Tdrd9-/- 14dpp testis
133	GSM475280	1	20022248	Mili IP	adult testis
225	GSM1528807	2	26588211	small RNA	Adult testes Asb1 ao31(Het)
227	GSM1528809	1	26588211	small RNA	Adult testes Asb1 ao34(Het)
346	GSM475280	1	20022248	Mili-IP	testis
442	GSM1096599	80	23523368	oxidized small RNA	Wild Type 10.5 dpp testes
443	GSM1096583	3	23523368	small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	7	23523368	small RNA	Wild Type 14.5 dpp testes
450	GSM1096603	1	23523368	oxidized small RNA	Wild Type 20.5 dpp testes
451	GSM1096587	1	23523368	small RNA	Wild Type 6 weeks dpp testes
452	GSM1096604	1	23523368	oxidized small RNA	Wild Type 6 weeks dpp testes

1 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	8:107016074-107016103:+	Sntb2 ENSMUST00000212524;

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	22121019	Journal	Nature. 2011 Nov 27;480(7376):264-7.
Title	Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing.
Authors	Reuter M, Berninger P, Chuma S, Shah H, Hosokawa M, Funaya C, Antony C, Sachidanandam R, Pillai RS.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	22902560	Journal	Mol Cell. 2012 Sep 28;47(6):970-9.
Title	A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing.
Authors	Xiol J, Cora E, Koglgruber R, Chuma S, Subramanian S, Hosokawa M, Reuter M, Yang Z, Berninger P, Palencia A, Benes V, Penninger J, Sachidanandam R, Pillai RS.

PubMed	20059948	Journal	Dev Cell. 2009 Dec;17(6):775-87.
Title	The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline.
Authors	Shoji M, Tanaka T, Hosokawa M, Reuter M, Stark A, Kato Y, Kondoh G, Okawa K, Chujo T, Suzuki T, Hata K, Martin SL, Noce T, Kuramochi-Miyagawa S, Nakano T, Sasaki H, Pillai RS, Nakatsuji N, Chuma S.

PubMed	20022248	Journal	Curr Biol. 2009 Dec 29;19(24):2066-76.
Title	A broadly conserved pathway generates 3'UTR-directed primary piRNAs.
Authors	Robine N, Lau NC, Balla S, Jin Z, Okamura K, Kuramochi-Miyagawa S, Blower MD, Lai EC.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.