Detail Information of piRNA: piR-mmu-4867

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
5	N/A	N/A	16751777	MILI IP	testis
11	GSM822760	72	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi +/+
12	GSM822758	42	22121019	Miwi IP	Testes, C57BL/6 P14 Miwi +/+
13	GSM822759	66	22121019	Miwi IP	Testes, C57BL/6 P20 Miwi +/+
14	GSM822761	69	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi +/ADH
15	GSM822762	16	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
16	GSM822763	13	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
17	GSM822764	36	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
31	GSM684624	53	22842725	Miwi CLIP	C57BL/6 adult testis
32	GSM684625	6	22842725	Miwi CLIP	C57BL/6 adult testis
50	GSM610965	2	21602304	small RNA	Male germ cell, Type A spermatogonia
51	GSM610966	47	21602304	small RNA	Male germ cell, Pachytene spermatocytes
52	GSM610967	91	21602304	small RNA	Male germ cell, Round spermatids
66	GSM509275	1	20439430	small RNA	MitoPLD+/+ E16.5 testis
121	GSM545783	2	20534472	Mov10L1 IP	wild type adult testis
132	GSM475279	64	20022248	Miwi IP	adult testis
133	GSM475280	6	20022248	Mili IP	adult testis
217	GSM1653802	11	25582079	MIWI CLIP	round spermatids
225	GSM1528807	120	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	150	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	217	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	219	26588211	small RNA	Adult testes Asb1 ao36(KO)
234	GSM433288	1	26115953	small RNA	18dpp hetero tdrd6 KO testes
235	GSM433289	12	26115953	small RNA	18dpp homo tdrd6 KO testes
236	GSM433290	9	26115953	small RNA	25dpp hetero tdrd6 KO testes
237	GSM433291	9	26115953	small RNA	25dpp homo tdrd6 KO testes
345	GSM475279	64	20022248	Miwi-IP	testis
346	GSM475280	6	20022248	Mili-IP	testis
347	GSM475281	82	20022248	small RNA	testis
447	GSM1096585	3	23523368	small RNA	Wild Type 17.5 dpp testes
448	GSM1096602	2	23523368	oxidized small RNA	Wild Type 17.5 dpp testes
450	GSM1096603	2	23523368	oxidized small RNA	Wild Type 20.5 dpp testes
451	GSM1096587	2	23523368	small RNA	Wild Type 6 weeks dpp testes
452	GSM1096604	1	23523368	oxidized small RNA	Wild Type 6 weeks dpp testes

1 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	5:149815200-149815229:-

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	16751777	Journal	Nature. 2006 Jul 13;442(7099):203-7.
Title	A novel class of small RNAs bind to MILI protein in mouse testes
Authors	Aravin A, Gaidatzis D, Pfeffer S, Lagos-Quintana M, Landgraf P, Iovino N, Morris P, Brownstein MJ, Kuramochi-Miyagawa S, Nakano T, Chien M, Russo JJ, Ju J, Sheridan R, Sander C, Zavolan M, Tuschl T.

PubMed	22121019	Journal	Nature. 2011 Nov 27;480(7376):264-7.
Title	Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing.
Authors	Reuter M, Berninger P, Chuma S, Shah H, Hosokawa M, Funaya C, Antony C, Sachidanandam R, Pillai RS.

PubMed	22842725	Journal	Nat Struct Mol Biol. 2012 Aug;19(8):773-81.
Title	Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis.
Authors	Vourekas A, Zheng Q, Alexiou P, Maragkakis M, Kirino Y, Gregory BD, Mourelatos Z.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	20439430	Journal	Genes Dev. 2010 May;24(9):887-92.
Title	MVH in piRNA processing and gene silencing of retrotransposons.
Authors	Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Takamatsu K, Chuma S, Kojima-Kita K, Shiromoto Y, Asada N, Toyoda A, Fujiyama A, Totoki Y, Shibata T, Kimura T, Nakatsuji N, Noce T, Sasaki H, Nakano T.

PubMed	20534472	Journal	Proc Natl Acad Sci U S A. 2010 Jun 29;107(26):11841-6.
Title	Mouse MOV10L1 associates with Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway.
Authors	Zheng K, Xiol J, Reuter M, Eckardt S, Leu NA, McLaughlin KJ, Stark A, Sachidanandam R, Pillai RS, Wang PJ.

PubMed	20022248	Journal	Curr Biol. 2009 Dec 29;19(24):2066-76.
Title	A broadly conserved pathway generates 3'UTR-directed primary piRNAs.
Authors	Robine N, Lau NC, Balla S, Jin Z, Okamura K, Kuramochi-Miyagawa S, Blower MD, Lai EC.

PubMed	25582079	Journal	Cell Res. 2015 Feb;25(2):193-207.
Title	MIWI and piRNA-mediated cleavage of messenger RNAs in mouse testes.
Authors	Zhang P, Kang JY, Gou LT, Wang J, Xue Y, Skogerboe G, Dai P, Huang DW, Chen R, Fu XD, Liu MF, He S.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.