Detail Information of piRNA: piR-mmu-4300

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
13	GSM822759	1	22121019	Miwi IP	Testes, C57BL/6 P20 Miwi +/+
57	GSM319953	2	18922463	Mili IP	10 dpp Dnmt3L heterozygotes testis
58	GSM319954	1	18922463	Mili IP	10 dpp Dnmt3L KO testis
80	N/A	1	22020280	Mili IP	Miwi2-/-_2 E16.5 fetal testis
86	N/A	1	22020280	Miwi2 IP	Miwi2DAH_2 E16.5 fetal testis
114	GSM958035	2	22902560	Mili IP	Fkbp6 +/-,P0,testis
115	GSM958036	4	22902560	Mili IP	Fkbp6 -/-,P0,testis
116	GSM958037	6	22902560	Mili IP	Fkbp6 +/-,P10,testis
117	GSM958038	30	22902560	Mili IP	Fkbp6 -/-,P10,testis
119	GSM958040	9	22902560	Mili IP	Tdrd1 -/-,E18,testis
120	GSM958041	19	22902560	Miwi2 IP	Tdrd1 +/-,E18,testis
225	GSM1528807	1	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	3	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	4	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	15	26588211	small RNA	Adult testes Asb1 ao36(KO)
246	GSM1318059	13	25262350	small RNA	E16.5 whole testes
247	GSM1318060	8	25262350	small RNA	E16.5 whole testes Hsp90-alpha KO
443	GSM1096583	6	23523368	small RNA	Wild Type 12.5 dpp testes
444	GSM1096600	11	23523368	oxidized small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	10	23523368	small RNA	Wild Type 14.5 dpp testes
446	GSM1096601	29	23523368	oxidized small RNA	Wild Type 14.5 dpp testes
451	GSM1096587	1	23523368	small RNA	Wild Type 6 weeks dpp testes

2 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	18:85698233-85698263:-		Simple_repeat Simple_repeat (AC)n;
Location 2	9:110281284-110281314:+	Mir6236 ENSMUST00000184437;	SINE B2 B2_Mm1t;

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	22121019	Journal	Nature. 2011 Nov 27;480(7376):264-7.
Title	Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing.
Authors	Reuter M, Berninger P, Chuma S, Shah H, Hosokawa M, Funaya C, Antony C, Sachidanandam R, Pillai RS.

PubMed	18922463	Journal	Mol Cell. 2008 Sep 26;31(6):785-99.
Title	A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice.
Authors	Aravin AA, Sachidanandam R, Bourc'his D, Schaefer C, Pezic D, Toth KF, Bestor T, Hannon GJ.

PubMed	22020280	Journal	Nature. 2011 Oct 23;480(7376):259-63.
Title	The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements.
Authors	De Fazio S, Bartonicek N, Di Giacomo M, Abreu-Goodger C, Sankar A, Funaya C, Antony C, Moreira PN, Enright AJ, O'Carroll D.

PubMed	22902560	Journal	Mol Cell. 2012 Sep 28;47(6):970-9.
Title	A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing.
Authors	Xiol J, Cora E, Koglgruber R, Chuma S, Subramanian S, Hosokawa M, Reuter M, Yang Z, Berninger P, Palencia A, Benes V, Penninger J, Sachidanandam R, Pillai RS.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	25262350	Journal	Nucleic Acids Res. 2014 Oct 29;42(19):11903-11
Title	HSP90a plays an important role in piRNA biogenesis and retrotransposon repression in mouse.
Authors	Ichiyanagi T,Ichiyanagi K,Ogawa A,Kuramochi-Miyagawa S,Nakano T,Chuma S,Sasaki H,Udono H.

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.