Detail Information of piRNA: piR-mmu-3832

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
50	GSM610965	1	21602304	small RNA	Male germ cell, Type A spermatogonia
61	GSM319957	11	18922463	Miwi2 IP	16.5 dpc testis
66	GSM509275	4	20439430	small RNA	MitoPLD+/+ E16.5 testis
69	GSM509278	1	20439430	small RNA	Miwi2-/- E16.5 testis
71	GSM509280	2	20439430	small RNA	MitoPLD-/- 10 dpp testis
86	N/A	1	22020280	Miwi2 IP	Miwi2DAH_2 E16.5 fetal testis
87	N/A	1	22020280	Miwi2 IP	wild_type_1 E16.5 fetal testis
120	GSM958041	13	22902560	Miwi2 IP	Tdrd1 +/-,E18,testis
225	GSM1528807	1	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	2	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	2	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	2	26588211	small RNA	Adult testes Asb1 ao36(KO)
236	GSM433290	1	26115953	small RNA	25dpp hetero tdrd6 KO testes
240	GSM433294	3	26115953	small RNA	18.5dpc hetero tdrd1 KO testes
441	GSM1096582	1	23523368	small RNA	Wild Type 10.5 dpp testes
443	GSM1096583	4	23523368	small RNA	Wild Type 12.5 dpp testes
444	GSM1096600	8	23523368	oxidized small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	3	23523368	small RNA	Wild Type 14.5 dpp testes
446	GSM1096601	1	23523368	oxidized small RNA	Wild Type 14.5 dpp testes
449	GSM1096586	2	23523368	small RNA	Wild Type 20.5 dpp testes

3367 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	15:89040169-89040198:-	Mov10l1 ENSMUST00000146993; Mov10l1 ENSMUST00000015509; Mov10l1 ENSMUST00000143030;
Hits not all shown! To search for more loci, you can Run Bowtie here or Blat in UCSC

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	18922463	Journal	Mol Cell. 2008 Sep 26;31(6):785-99.
Title	A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice.
Authors	Aravin AA, Sachidanandam R, Bourc'his D, Schaefer C, Pezic D, Toth KF, Bestor T, Hannon GJ.

PubMed	20439430	Journal	Genes Dev. 2010 May;24(9):887-92.
Title	MVH in piRNA processing and gene silencing of retrotransposons.
Authors	Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Takamatsu K, Chuma S, Kojima-Kita K, Shiromoto Y, Asada N, Toyoda A, Fujiyama A, Totoki Y, Shibata T, Kimura T, Nakatsuji N, Noce T, Sasaki H, Nakano T.

PubMed	22020280	Journal	Nature. 2011 Oct 23;480(7376):259-63.
Title	The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements.
Authors	De Fazio S, Bartonicek N, Di Giacomo M, Abreu-Goodger C, Sankar A, Funaya C, Antony C, Moreira PN, Enright AJ, O'Carroll D.

PubMed	22902560	Journal	Mol Cell. 2012 Sep 28;47(6):970-9.
Title	A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing.
Authors	Xiol J, Cora E, Koglgruber R, Chuma S, Subramanian S, Hosokawa M, Reuter M, Yang Z, Berninger P, Palencia A, Benes V, Penninger J, Sachidanandam R, Pillai RS.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.