Detail Information of piRNA: piR-mmu-2865

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
50	GSM610965	1	21602304	small RNA	Male germ cell, Type A spermatogonia
57	GSM319953	35	18922463	Mili IP	10 dpp Dnmt3L heterozygotes testis
58	GSM319954	136	18922463	Mili IP	10 dpp Dnmt3L KO testis
59	GSM319955	1	18922463	small RNA	16.5 dpc testis
60	GSM319956	2	18922463	Mili IP	16.5 dpc testis
61	GSM319957	1	18922463	Miwi2 IP	16.5 dpc testis
62	GSM319958	1	18922463	small RNA	4-6 week ovary
72	GSM179088	9	17446352	Mili IP	10 dpp testis
73	N/A	1	22020280	Mili IP	Mili_MiliDAH_1 E16.5 fetal testis
74	N/A	3	22020280	Mili IP	Mili_MiliDAH_2 E16.5 fetal testis
75	N/A	3	22020280	Mili IP	Miwi2DAH_1 E16.5 fetal testis
76	N/A	1	22020280	Mili IP	Miwi2DAH_2 E16.5 fetal testis
78	N/A	1	22020280	Mili IP	Miwi2+/-_2 E16.5 fetal testis
79	N/A	1	22020280	Mili IP	Miwi2-/-_1 E16.5 fetal testis
80	N/A	2	22020280	Mili IP	Miwi2-/-_2 E16.5 fetal testis
81	N/A	1	22020280	Mili IP	wild_type_1 E16.5 fetal testis
114	GSM958035	1	22902560	Mili IP	Fkbp6 +/-,P0,testis
240	GSM433294	1	26115953	small RNA	18.5dpc hetero tdrd1 KO testes
246	GSM1318059	56	25262350	small RNA	E16.5 whole testes
247	GSM1318060	27	25262350	small RNA	E16.5 whole testes Hsp90-alpha KO
443	GSM1096583	2	23523368	small RNA	Wild Type 12.5 dpp testes
444	GSM1096600	18	23523368	oxidized small RNA	Wild Type 12.5 dpp testes
446	GSM1096601	18	23523368	oxidized small RNA	Wild Type 14.5 dpp testes

1 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	7:6614860-6614887:-		LTR ERVK IAPLTR3;

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	18922463	Journal	Mol Cell. 2008 Sep 26;31(6):785-99.
Title	A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice.
Authors	Aravin AA, Sachidanandam R, Bourc'his D, Schaefer C, Pezic D, Toth KF, Bestor T, Hannon GJ.

PubMed	17446352	Journal	Science. 2007 May 4;316(5825):744-7.
Title	Developmentally regulated piRNA clusters implicate MILI in transposon control.
Authors	Aravin AA, Sachidanandam R, Girard A, Fejes-Toth K, Hannon GJ.

PubMed	22020280	Journal	Nature. 2011 Oct 23;480(7376):259-63.
Title	The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements.
Authors	De Fazio S, Bartonicek N, Di Giacomo M, Abreu-Goodger C, Sankar A, Funaya C, Antony C, Moreira PN, Enright AJ, O'Carroll D.

PubMed	22902560	Journal	Mol Cell. 2012 Sep 28;47(6):970-9.
Title	A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing.
Authors	Xiol J, Cora E, Koglgruber R, Chuma S, Subramanian S, Hosokawa M, Reuter M, Yang Z, Berninger P, Palencia A, Benes V, Penninger J, Sachidanandam R, Pillai RS.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	25262350	Journal	Nucleic Acids Res. 2014 Oct 29;42(19):11903-11
Title	HSP90a plays an important role in piRNA biogenesis and retrotransposon repression in mouse.
Authors	Ichiyanagi T,Ichiyanagi K,Ogawa A,Kuramochi-Miyagawa S,Nakano T,Chuma S,Sasaki H,Udono H.

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.