Detail Information of piRNA: piR-mmu-2275

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
11	GSM822760	19	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi +/+
12	GSM822758	1	22121019	Miwi IP	Testes, C57BL/6 P14 Miwi +/+
13	GSM822759	11	22121019	Miwi IP	Testes, C57BL/6 P20 Miwi +/+
14	GSM822761	16	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi +/ADH
15	GSM822762	1	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
16	GSM822763	11	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
17	GSM822764	14	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
31	GSM684624	5	22842725	Miwi CLIP	C57BL/6 adult testis
50	GSM610965	3	21602304	small RNA	Male germ cell, Type A spermatogonia
51	GSM610966	28	21602304	small RNA	Male germ cell, Pachytene spermatocytes
52	GSM610967	217	21602304	small RNA	Male germ cell, Round spermatids
116	GSM958037	3	22902560	Mili IP	Fkbp6 +/-,P10,testis
117	GSM958038	4	22902560	Mili IP	Fkbp6 -/-,P10,testis
120	GSM958041	3	22902560	Miwi2 IP	Tdrd1 +/-,E18,testis
121	GSM545783	1	20534472	Mov10L1 IP	wild type adult testis
126	GSM466728	2	20059948	Mili IP	Tdrd9+/- 14dpp testis
129	GSM466729	5	20059948	Mili IP	Tdrd9+/- 14dpp testis
130	GSM466730	4	20059948	Mili IP	Tdrd9-/- 14dpp testis
131	GSM466731	4	20059948	Mili IP	Tdrd9-/- 14dpp testis
225	GSM1528807	3	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	9	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	4	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	10	26588211	small RNA	Adult testes Asb1 ao36(KO)
442	GSM1096599	76	23523368	oxidized small RNA	Wild Type 10.5 dpp testes
447	GSM1096585	2	23523368	small RNA	Wild Type 17.5 dpp testes
449	GSM1096586	1	23523368	small RNA	Wild Type 20.5 dpp testes
450	GSM1096603	3	23523368	oxidized small RNA	Wild Type 20.5 dpp testes
451	GSM1096587	2	23523368	small RNA	Wild Type 6 weeks dpp testes

1 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	5:136935669-136935698:+	4933404O12Rik ENSMUST00000181045; 4933404O12Rik ENSMUST00000181190;	SINE B2 B2_Mm1a;

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	22121019	Journal	Nature. 2011 Nov 27;480(7376):264-7.
Title	Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing.
Authors	Reuter M, Berninger P, Chuma S, Shah H, Hosokawa M, Funaya C, Antony C, Sachidanandam R, Pillai RS.

PubMed	22842725	Journal	Nat Struct Mol Biol. 2012 Aug;19(8):773-81.
Title	Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis.
Authors	Vourekas A, Zheng Q, Alexiou P, Maragkakis M, Kirino Y, Gregory BD, Mourelatos Z.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	22902560	Journal	Mol Cell. 2012 Sep 28;47(6):970-9.
Title	A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing.
Authors	Xiol J, Cora E, Koglgruber R, Chuma S, Subramanian S, Hosokawa M, Reuter M, Yang Z, Berninger P, Palencia A, Benes V, Penninger J, Sachidanandam R, Pillai RS.

PubMed	20534472	Journal	Proc Natl Acad Sci U S A. 2010 Jun 29;107(26):11841-6.
Title	Mouse MOV10L1 associates with Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway.
Authors	Zheng K, Xiol J, Reuter M, Eckardt S, Leu NA, McLaughlin KJ, Stark A, Sachidanandam R, Pillai RS, Wang PJ.

PubMed	20059948	Journal	Dev Cell. 2009 Dec;17(6):775-87.
Title	The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline.
Authors	Shoji M, Tanaka T, Hosokawa M, Reuter M, Stark A, Kato Y, Kondoh G, Okawa K, Chujo T, Suzuki T, Hata K, Martin SL, Noce T, Kuramochi-Miyagawa S, Nakano T, Sasaki H, Pillai RS, Nakatsuji N, Chuma S.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.