Detail Information of piRNA: piR-mmu-2145

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
50	GSM610965	51	21602304	small RNA	Male germ cell, Type A spermatogonia
52	GSM610967	3	21602304	small RNA	Male germ cell, Round spermatids
59	GSM319955	5	18922463	small RNA	16.5 dpc testis
61	GSM319957	3	18922463	Miwi2 IP	16.5 dpc testis
122	N/A	118	21515829	small RNA	hippocampus
217	GSM1653802	3	25582079	MIWI CLIP	round spermatids
225	GSM1528807	17	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	12	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	10	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	16	26588211	small RNA	Adult testes Asb1 ao36(KO)
234	GSM433288	4	26115953	small RNA	18dpp hetero tdrd6 KO testes
235	GSM433289	7	26115953	small RNA	18dpp homo tdrd6 KO testes
236	GSM433290	1	26115953	small RNA	25dpp hetero tdrd6 KO testes
240	GSM433294	3	26115953	small RNA	18.5dpc hetero tdrd1 KO testes
246	GSM1318059	1	25262350	small RNA	E16.5 whole testes
247	GSM1318060	1	25262350	small RNA	E16.5 whole testes Hsp90-alpha KO
443	GSM1096583	6	23523368	small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	1	23523368	small RNA	Wild Type 14.5 dpp testes
449	GSM1096586	1	23523368	small RNA	Wild Type 20.5 dpp testes
451	GSM1096587	5	23523368	small RNA	Wild Type 6 weeks dpp testes

1 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	15:83149763-83149794:+	Rnu12 ENSMUST00000083242;

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	18922463	Journal	Mol Cell. 2008 Sep 26;31(6):785-99.
Title	A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice.
Authors	Aravin AA, Sachidanandam R, Bourc'his D, Schaefer C, Pezic D, Toth KF, Bestor T, Hannon GJ.

PubMed	21515829	Journal	RNA. 2011 Jun;17(6):1090-9.
Title	Identification of piRNAs in the central nervous system.
Authors	Lee EJ, Banerjee S, Zhou H, Jammalamadaka A, Arcila M, Manjunath BS, Kosik KS.

PubMed	25582079	Journal	Cell Res. 2015 Feb;25(2):193-207.
Title	MIWI and piRNA-mediated cleavage of messenger RNAs in mouse testes.
Authors	Zhang P, Kang JY, Gou LT, Wang J, Xue Y, Skogerboe G, Dai P, Huang DW, Chen R, Fu XD, Liu MF, He S.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	25262350	Journal	Nucleic Acids Res. 2014 Oct 29;42(19):11903-11
Title	HSP90a plays an important role in piRNA biogenesis and retrotransposon repression in mouse.
Authors	Ichiyanagi T,Ichiyanagi K,Ogawa A,Kuramochi-Miyagawa S,Nakano T,Chuma S,Sasaki H,Udono H.

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.