Detail Information of piRNA: piR-mmu-2121

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
17	GSM822764	1	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
51	GSM610966	1	21602304	small RNA	Male germ cell, Pachytene spermatocytes
85	N/A	1	22020280	Miwi2 IP	Miwi2DAH_1 E16.5 fetal testis
120	GSM958041	6	22902560	Miwi2 IP	Tdrd1 +/-,E18,testis
225	GSM1528807	1	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	1	26588211	small RNA	Adult testes Asb1 ao32(KO)
234	GSM433288	1	26115953	small RNA	18dpp hetero tdrd6 KO testes
235	GSM433289	4	26115953	small RNA	18dpp homo tdrd6 KO testes
236	GSM433290	3	26115953	small RNA	25dpp hetero tdrd6 KO testes
237	GSM433291	1	26115953	small RNA	25dpp homo tdrd6 KO testes
240	GSM433294	4	26115953	small RNA	18.5dpc hetero tdrd1 KO testes
443	GSM1096583	2	23523368	small RNA	Wild Type 12.5 dpp testes
444	GSM1096600	2	23523368	oxidized small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	21	23523368	small RNA	Wild Type 14.5 dpp testes
449	GSM1096586	2	23523368	small RNA	Wild Type 20.5 dpp testes

19 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	4:42468143-42468172:+	Gm2163 ENSMUST00000179734;
Hits not all shown! To search for more loci, you can Run Bowtie here or Blat in UCSC

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	22121019	Journal	Nature. 2011 Nov 27;480(7376):264-7.
Title	Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing.
Authors	Reuter M, Berninger P, Chuma S, Shah H, Hosokawa M, Funaya C, Antony C, Sachidanandam R, Pillai RS.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	22020280	Journal	Nature. 2011 Oct 23;480(7376):259-63.
Title	The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements.
Authors	De Fazio S, Bartonicek N, Di Giacomo M, Abreu-Goodger C, Sankar A, Funaya C, Antony C, Moreira PN, Enright AJ, O'Carroll D.

PubMed	22902560	Journal	Mol Cell. 2012 Sep 28;47(6):970-9.
Title	A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing.
Authors	Xiol J, Cora E, Koglgruber R, Chuma S, Subramanian S, Hosokawa M, Reuter M, Yang Z, Berninger P, Palencia A, Benes V, Penninger J, Sachidanandam R, Pillai RS.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.