Detail Information of piRNA: piR-mmu-1820

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
6	GSM113695	1	16778019	Chromatography	testes tissue from Swiss Webster male mice, 8-10 weeks old
16	GSM822763	1	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
37	GSM684622	4	22842725	Mili CLIP	C57BL/6 adult testis
38	GSM684623	4	22842725	Mili CLIP	C57BL/6 adult testis
115	GSM958036	1	22902560	Mili IP	Fkbp6 -/-,P0,testis
225	GSM1528807	5	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	9	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	8	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	7	26588211	small RNA	Adult testes Asb1 ao36(KO)
234	GSM433288	3	26115953	small RNA	18dpp hetero tdrd6 KO testes
235	GSM433289	3	26115953	small RNA	18dpp homo tdrd6 KO testes
236	GSM433290	5	26115953	small RNA	25dpp hetero tdrd6 KO testes
443	GSM1096583	11	23523368	small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	19	23523368	small RNA	Wild Type 14.5 dpp testes
446	GSM1096601	36	23523368	oxidized small RNA	Wild Type 14.5 dpp testes
449	GSM1096586	12	23523368	small RNA	Wild Type 20.5 dpp testes
450	GSM1096603	5	23523368	oxidized small RNA	Wild Type 20.5 dpp testes
451	GSM1096587	2	23523368	small RNA	Wild Type 6 weeks dpp testes

2 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	4:62224603-62224630:-	Zfp37 ENSMUST00000212325;
Location 2	4:62234900-62234927:+		LTR ERVL-MaLR ORR1B1;

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	16778019	Journal	Science. 2006 Jul 21;313(5785):363-7.
Title	Characterization of the piRNA complex from rat testes.
Authors	Lau NC, Seto AG, Kim J, Kuramochi-Miyagawa S, Nakano T, Bartel DP, Kingston RE.

PubMed	22121019	Journal	Nature. 2011 Nov 27;480(7376):264-7.
Title	Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing.
Authors	Reuter M, Berninger P, Chuma S, Shah H, Hosokawa M, Funaya C, Antony C, Sachidanandam R, Pillai RS.

PubMed	22842725	Journal	Nat Struct Mol Biol. 2012 Aug;19(8):773-81.
Title	Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis.
Authors	Vourekas A, Zheng Q, Alexiou P, Maragkakis M, Kirino Y, Gregory BD, Mourelatos Z.

PubMed	22902560	Journal	Mol Cell. 2012 Sep 28;47(6):970-9.
Title	A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing.
Authors	Xiol J, Cora E, Koglgruber R, Chuma S, Subramanian S, Hosokawa M, Reuter M, Yang Z, Berninger P, Palencia A, Benes V, Penninger J, Sachidanandam R, Pillai RS.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.