Detail Information of piRNA: piR-mmu-1626

Dataset	Accession	Reads	PubMed	Method	Tissue
4	N/A	N/A	16751776	small RNA	testis
11	GSM822760	1	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi +/+
12	GSM822758	3	22121019	Miwi IP	Testes, C57BL/6 P14 Miwi +/+
13	GSM822759	3	22121019	Miwi IP	Testes, C57BL/6 P20 Miwi +/+
14	GSM822761	1	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi +/ADH
16	GSM822763	1	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
17	GSM822764	1	22121019	Miwi IP	Testes, C57BL/6 Adult Miwi -/ADH
31	GSM684624	5	22842725	Miwi CLIP	C57BL/6 adult testis
51	GSM610966	10	21602304	small RNA	Male germ cell, Pachytene spermatocytes
52	GSM610967	23	21602304	small RNA	Male germ cell, Round spermatids
69	GSM509278	1	20439430	small RNA	Miwi2-/- E16.5 testis
73	N/A	2	22020280	Mili IP	Mili_MiliDAH_1 E16.5 fetal testis
74	N/A	2	22020280	Mili IP	Mili_MiliDAH_2 E16.5 fetal testis
75	N/A	1	22020280	Mili IP	Miwi2DAH_1 E16.5 fetal testis
82	N/A	1	22020280	Mili IP	wild_type_2 E16.5 fetal testis
116	GSM958037	1	22902560	Mili IP	Fkbp6 +/-,P10,testis
117	GSM958038	1	22902560	Mili IP	Fkbp6 -/-,P10,testis
119	GSM958040	2	22902560	Mili IP	Tdrd1 -/-,E18,testis
126	GSM466728	1	20059948	Mili IP	Tdrd9+/- 14dpp testis
130	GSM466730	1	20059948	Mili IP	Tdrd9-/- 14dpp testis
132	GSM475279	3	20022248	Miwi IP	adult testis
133	GSM475280	1	20022248	Mili IP	adult testis
225	GSM1528807	20	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	21	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	48	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	31	26588211	small RNA	Adult testes Asb1 ao36(KO)
234	GSM433288	6	26115953	small RNA	18dpp hetero tdrd6 KO testes
235	GSM433289	5	26115953	small RNA	18dpp homo tdrd6 KO testes
236	GSM433290	7	26115953	small RNA	25dpp hetero tdrd6 KO testes
237	GSM433291	11	26115953	small RNA	25dpp homo tdrd6 KO testes
345	GSM475279	3	20022248	Miwi-IP	testis
346	GSM475280	1	20022248	Mili-IP	testis
347	GSM475281	12	20022248	small RNA	testis
441	GSM1096582	4	23523368	small RNA	Wild Type 10.5 dpp testes
443	GSM1096583	1	23523368	small RNA	Wild Type 12.5 dpp testes
444	GSM1096600	2	23523368	oxidized small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	3	23523368	small RNA	Wild Type 14.5 dpp testes
449	GSM1096586	3	23523368	small RNA	Wild Type 20.5 dpp testes
450	GSM1096603	3	23523368	oxidized small RNA	Wild Type 20.5 dpp testes
451	GSM1096587	3	23523368	small RNA	Wild Type 6 weeks dpp testes

1 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	15:83365480-83365508:-	1700001L05Rik ENSMUST00000178628; 1700001L05Rik ENSMUST00000179705; 1700001L05Rik ENSMUST00000100370;

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	22121019	Journal	Nature. 2011 Nov 27;480(7376):264-7.
Title	Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing.
Authors	Reuter M, Berninger P, Chuma S, Shah H, Hosokawa M, Funaya C, Antony C, Sachidanandam R, Pillai RS.

PubMed	22842725	Journal	Nat Struct Mol Biol. 2012 Aug;19(8):773-81.
Title	Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis.
Authors	Vourekas A, Zheng Q, Alexiou P, Maragkakis M, Kirino Y, Gregory BD, Mourelatos Z.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	20439430	Journal	Genes Dev. 2010 May;24(9):887-92.
Title	MVH in piRNA processing and gene silencing of retrotransposons.
Authors	Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Takamatsu K, Chuma S, Kojima-Kita K, Shiromoto Y, Asada N, Toyoda A, Fujiyama A, Totoki Y, Shibata T, Kimura T, Nakatsuji N, Noce T, Sasaki H, Nakano T.

PubMed	22020280	Journal	Nature. 2011 Oct 23;480(7376):259-63.
Title	The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements.
Authors	De Fazio S, Bartonicek N, Di Giacomo M, Abreu-Goodger C, Sankar A, Funaya C, Antony C, Moreira PN, Enright AJ, O'Carroll D.

PubMed	22902560	Journal	Mol Cell. 2012 Sep 28;47(6):970-9.
Title	A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing.
Authors	Xiol J, Cora E, Koglgruber R, Chuma S, Subramanian S, Hosokawa M, Reuter M, Yang Z, Berninger P, Palencia A, Benes V, Penninger J, Sachidanandam R, Pillai RS.

PubMed	20059948	Journal	Dev Cell. 2009 Dec;17(6):775-87.
Title	The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline.
Authors	Shoji M, Tanaka T, Hosokawa M, Reuter M, Stark A, Kato Y, Kondoh G, Okawa K, Chujo T, Suzuki T, Hata K, Martin SL, Noce T, Kuramochi-Miyagawa S, Nakano T, Sasaki H, Pillai RS, Nakatsuji N, Chuma S.

PubMed	20022248	Journal	Curr Biol. 2009 Dec 29;19(24):2066-76.
Title	A broadly conserved pathway generates 3'UTR-directed primary piRNAs.
Authors	Robine N, Lau NC, Balla S, Jin Z, Okamura K, Kuramochi-Miyagawa S, Blower MD, Lai EC.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.