Detail Information of piRNA: piR-mmu-12323

Dataset	Accession	Reads	PubMed	Method	Tissue
5	N/A	N/A	16751777	MILI IP	testis
33	GSM684626	1	22842725	Miwi CLIP	C57BL/6 adult testis
35	GSM684620	41	22842725	Mili CLIP	C57BL/6 adult testis
36	GSM684621	100	22842725	Mili CLIP	C57BL/6 adult testis
37	GSM684622	16	22842725	Mili CLIP	C57BL/6 adult testis
38	GSM684623	58	22842725	Mili CLIP	C57BL/6 adult testis
51	GSM610966	23	21602304	small RNA	Male germ cell, Pachytene spermatocytes
52	GSM610967	6	21602304	small RNA	Male germ cell, Round spermatids
60	GSM319956	1	18922463	Mili IP	16.5 dpc testis
121	GSM545783	1	20534472	Mov10L1 IP	wild type adult testis
129	GSM466729	2	20059948	Mili IP	Tdrd9+/- 14dpp testis
133	GSM475280	2	20022248	Mili IP	adult testis
217	GSM1653802	1	25582079	MIWI CLIP	round spermatids
225	GSM1528807	6	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	12	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	27	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	22	26588211	small RNA	Adult testes Asb1 ao36(KO)
234	GSM433288	54	26115953	small RNA	18dpp hetero tdrd6 KO testes
235	GSM433289	29	26115953	small RNA	18dpp homo tdrd6 KO testes
236	GSM433290	47	26115953	small RNA	25dpp hetero tdrd6 KO testes
237	GSM433291	19	26115953	small RNA	25dpp homo tdrd6 KO testes
346	GSM475280	2	20022248	Mili-IP	testis
347	GSM475281	7	20022248	small RNA	testis
441	GSM1096582	37	23523368	small RNA	Wild Type 10.5 dpp testes
443	GSM1096583	2545	23523368	small RNA	Wild Type 12.5 dpp testes
444	GSM1096600	105	23523368	oxidized small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	1326	23523368	small RNA	Wild Type 14.5 dpp testes
446	GSM1096601	150	23523368	oxidized small RNA	Wild Type 14.5 dpp testes
447	GSM1096585	79	23523368	small RNA	Wild Type 17.5 dpp testes
448	GSM1096602	5	23523368	oxidized small RNA	Wild Type 17.5 dpp testes
449	GSM1096586	80	23523368	small RNA	Wild Type 20.5 dpp testes
450	GSM1096603	12	23523368	oxidized small RNA	Wild Type 20.5 dpp testes
451	GSM1096587	48	23523368	small RNA	Wild Type 6 weeks dpp testes
452	GSM1096604	5	23523368	oxidized small RNA	Wild Type 6 weeks dpp testes

1 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	17:27333961-27333988:+	Gm10505 ENSMUST00000232285; Gm10505 ENSMUST00000232497; Gm10505 ENSMUST00000231770; Gm10505 ENSMUST00000231262; Gm10505 ENSMUST00000232363; Gm10505 ENSMUST00000231707; Gm10505 ENSMUST00000232070; Gm10505 ENSMUST00000231462; Gm10505 ENSMUST00000232675; Gm10505 ENSMUST00000231336; Gm10505 ENSMUST00000232171; Gm10505 ENSMUST00000231637; Gm10505 ENSMUST00000232125; Gm10505 ENSMUST00000231456;

PubMed	16751777	Journal	Nature. 2006 Jul 13;442(7099):203-7.
Title	A novel class of small RNAs bind to MILI protein in mouse testes
Authors	Aravin A, Gaidatzis D, Pfeffer S, Lagos-Quintana M, Landgraf P, Iovino N, Morris P, Brownstein MJ, Kuramochi-Miyagawa S, Nakano T, Chien M, Russo JJ, Ju J, Sheridan R, Sander C, Zavolan M, Tuschl T.

PubMed	22842725	Journal	Nat Struct Mol Biol. 2012 Aug;19(8):773-81.
Title	Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis.
Authors	Vourekas A, Zheng Q, Alexiou P, Maragkakis M, Kirino Y, Gregory BD, Mourelatos Z.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	18922463	Journal	Mol Cell. 2008 Sep 26;31(6):785-99.
Title	A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice.
Authors	Aravin AA, Sachidanandam R, Bourc'his D, Schaefer C, Pezic D, Toth KF, Bestor T, Hannon GJ.

PubMed	20534472	Journal	Proc Natl Acad Sci U S A. 2010 Jun 29;107(26):11841-6.
Title	Mouse MOV10L1 associates with Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway.
Authors	Zheng K, Xiol J, Reuter M, Eckardt S, Leu NA, McLaughlin KJ, Stark A, Sachidanandam R, Pillai RS, Wang PJ.

PubMed	20059948	Journal	Dev Cell. 2009 Dec;17(6):775-87.
Title	The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline.
Authors	Shoji M, Tanaka T, Hosokawa M, Reuter M, Stark A, Kato Y, Kondoh G, Okawa K, Chujo T, Suzuki T, Hata K, Martin SL, Noce T, Kuramochi-Miyagawa S, Nakano T, Sasaki H, Pillai RS, Nakatsuji N, Chuma S.

PubMed	20022248	Journal	Curr Biol. 2009 Dec 29;19(24):2066-76.
Title	A broadly conserved pathway generates 3'UTR-directed primary piRNAs.
Authors	Robine N, Lau NC, Balla S, Jin Z, Okamura K, Kuramochi-Miyagawa S, Blower MD, Lai EC.

PubMed	25582079	Journal	Cell Res. 2015 Feb;25(2):193-207.
Title	MIWI and piRNA-mediated cleavage of messenger RNAs in mouse testes.
Authors	Zhang P, Kang JY, Gou LT, Wang J, Xue Y, Skogerboe G, Dai P, Huang DW, Chen R, Fu XD, Liu MF, He S.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.