Detail Information of piRNA: piR-mmu-12095

Dataset	Accession	Reads	PubMed	Method	Tissue
5	N/A	N/A	16751777	MILI IP	testis
51	GSM610966	16	21602304	small RNA	Male germ cell, Pachytene spermatocytes
52	GSM610967	3	21602304	small RNA	Male germ cell, Round spermatids
63	GSM319959	1	18922463	small RNA	2 dpp testis
66	GSM509275	1	20439430	small RNA	MitoPLD+/+ E16.5 testis
68	GSM509277	2	20439430	small RNA	Mili-/- E16.5 testis
76	N/A	2	22020280	Mili IP	Miwi2DAH_2 E16.5 fetal testis
78	N/A	1	22020280	Mili IP	Miwi2+/-_2 E16.5 fetal testis
121	GSM545783	4	20534472	Mov10L1 IP	wild type adult testis
126	GSM466728	4	20059948	Mili IP	Tdrd9+/- 14dpp testis
129	GSM466729	5	20059948	Mili IP	Tdrd9+/- 14dpp testis
132	GSM475279	8	20022248	Miwi IP	adult testis
133	GSM475280	58	20022248	Mili IP	adult testis
225	GSM1528807	48	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	16	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	13	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	11	26588211	small RNA	Adult testes Asb1 ao36(KO)
234	GSM433288	8	26115953	small RNA	18dpp hetero tdrd6 KO testes
235	GSM433289	3	26115953	small RNA	18dpp homo tdrd6 KO testes
236	GSM433290	5	26115953	small RNA	25dpp hetero tdrd6 KO testes
237	GSM433291	2	26115953	small RNA	25dpp homo tdrd6 KO testes
345	GSM475279	8	20022248	Miwi-IP	testis
346	GSM475280	58	20022248	Mili-IP	testis
347	GSM475281	23	20022248	small RNA	testis
441	GSM1096582	38	23523368	small RNA	Wild Type 10.5 dpp testes
443	GSM1096583	209	23523368	small RNA	Wild Type 12.5 dpp testes
444	GSM1096600	425	23523368	oxidized small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	875	23523368	small RNA	Wild Type 14.5 dpp testes
446	GSM1096601	1264	23523368	oxidized small RNA	Wild Type 14.5 dpp testes
447	GSM1096585	42	23523368	small RNA	Wild Type 17.5 dpp testes
448	GSM1096602	152	23523368	oxidized small RNA	Wild Type 17.5 dpp testes
449	GSM1096586	139	23523368	small RNA	Wild Type 20.5 dpp testes
450	GSM1096603	328	23523368	oxidized small RNA	Wild Type 20.5 dpp testes
451	GSM1096587	99	23523368	small RNA	Wild Type 6 weeks dpp testes
452	GSM1096604	191	23523368	oxidized small RNA	Wild Type 6 weeks dpp testes

1 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	17:27329491-27329517:+	Gm10505 ENSMUST00000232285; Gm10505 ENSMUST00000232497; Gm10505 ENSMUST00000231770; Gm10505 ENSMUST00000231262; Gm10505 ENSMUST00000232363; Gm10505 ENSMUST00000231707; Gm10505 ENSMUST00000232070; Gm10505 ENSMUST00000231462; Gm10505 ENSMUST00000232675; Gm10505 ENSMUST00000231336; Gm10505 ENSMUST00000232171; Gm10505 ENSMUST00000231637; Gm10505 ENSMUST00000232125;

PubMed	16751777	Journal	Nature. 2006 Jul 13;442(7099):203-7.
Title	A novel class of small RNAs bind to MILI protein in mouse testes
Authors	Aravin A, Gaidatzis D, Pfeffer S, Lagos-Quintana M, Landgraf P, Iovino N, Morris P, Brownstein MJ, Kuramochi-Miyagawa S, Nakano T, Chien M, Russo JJ, Ju J, Sheridan R, Sander C, Zavolan M, Tuschl T.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	18922463	Journal	Mol Cell. 2008 Sep 26;31(6):785-99.
Title	A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice.
Authors	Aravin AA, Sachidanandam R, Bourc'his D, Schaefer C, Pezic D, Toth KF, Bestor T, Hannon GJ.

PubMed	20439430	Journal	Genes Dev. 2010 May;24(9):887-92.
Title	MVH in piRNA processing and gene silencing of retrotransposons.
Authors	Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Takamatsu K, Chuma S, Kojima-Kita K, Shiromoto Y, Asada N, Toyoda A, Fujiyama A, Totoki Y, Shibata T, Kimura T, Nakatsuji N, Noce T, Sasaki H, Nakano T.

PubMed	22020280	Journal	Nature. 2011 Oct 23;480(7376):259-63.
Title	The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements.
Authors	De Fazio S, Bartonicek N, Di Giacomo M, Abreu-Goodger C, Sankar A, Funaya C, Antony C, Moreira PN, Enright AJ, O'Carroll D.

PubMed	20534472	Journal	Proc Natl Acad Sci U S A. 2010 Jun 29;107(26):11841-6.
Title	Mouse MOV10L1 associates with Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway.
Authors	Zheng K, Xiol J, Reuter M, Eckardt S, Leu NA, McLaughlin KJ, Stark A, Sachidanandam R, Pillai RS, Wang PJ.

PubMed	20059948	Journal	Dev Cell. 2009 Dec;17(6):775-87.
Title	The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline.
Authors	Shoji M, Tanaka T, Hosokawa M, Reuter M, Stark A, Kato Y, Kondoh G, Okawa K, Chujo T, Suzuki T, Hata K, Martin SL, Noce T, Kuramochi-Miyagawa S, Nakano T, Sasaki H, Pillai RS, Nakatsuji N, Chuma S.

PubMed	20022248	Journal	Curr Biol. 2009 Dec 29;19(24):2066-76.
Title	A broadly conserved pathway generates 3'UTR-directed primary piRNAs.
Authors	Robine N, Lau NC, Balla S, Jin Z, Okamura K, Kuramochi-Miyagawa S, Blower MD, Lai EC.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.