Detail Information of piRNA: piR-mmu-11788

Dataset	Accession	Reads	PubMed	Method	Tissue
5	N/A	N/A	16751777	MILI IP	testis
10	N/A	N/A	16766680	small RNA	testis
51	GSM610966	14	21602304	small RNA	Male germ cell, Pachytene spermatocytes
52	GSM610967	34	21602304	small RNA	Male germ cell, Round spermatids
66	GSM509275	1	20439430	small RNA	MitoPLD+/+ E16.5 testis
68	GSM509277	2	20439430	small RNA	Mili-/- E16.5 testis
77	N/A	2	22020280	Mili IP	Miwi2+/-_1 E16.5 fetal testis
114	GSM958035	3	22902560	Mili IP	Fkbp6 +/-,P0,testis
119	GSM958040	1	22902560	Mili IP	Tdrd1 -/-,E18,testis
121	GSM545783	17	20534472	Mov10L1 IP	wild type adult testis
126	GSM466728	7	20059948	Mili IP	Tdrd9+/- 14dpp testis
129	GSM466729	5	20059948	Mili IP	Tdrd9+/- 14dpp testis
132	GSM475279	11	20022248	Miwi IP	adult testis
133	GSM475280	68	20022248	Mili IP	adult testis
225	GSM1528807	80	26588211	small RNA	Adult testes Asb1 ao31(Het)
226	GSM1528808	99	26588211	small RNA	Adult testes Asb1 ao32(KO)
227	GSM1528809	219	26588211	small RNA	Adult testes Asb1 ao34(Het)
228	GSM1528810	160	26588211	small RNA	Adult testes Asb1 ao36(KO)
234	GSM433288	44	26115953	small RNA	18dpp hetero tdrd6 KO testes
235	GSM433289	162	26115953	small RNA	18dpp homo tdrd6 KO testes
236	GSM433290	29	26115953	small RNA	25dpp hetero tdrd6 KO testes
237	GSM433291	12	26115953	small RNA	25dpp homo tdrd6 KO testes
345	GSM475279	11	20022248	Miwi-IP	testis
346	GSM475280	68	20022248	Mili-IP	testis
347	GSM475281	80	20022248	small RNA	testis
441	GSM1096582	22	23523368	small RNA	Wild Type 10.5 dpp testes
442	GSM1096599	63	23523368	oxidized small RNA	Wild Type 10.5 dpp testes
443	GSM1096583	97	23523368	small RNA	Wild Type 12.5 dpp testes
444	GSM1096600	65	23523368	oxidized small RNA	Wild Type 12.5 dpp testes
445	GSM1096584	212	23523368	small RNA	Wild Type 14.5 dpp testes
446	GSM1096601	394	23523368	oxidized small RNA	Wild Type 14.5 dpp testes
447	GSM1096585	11	23523368	small RNA	Wild Type 17.5 dpp testes
448	GSM1096602	33	23523368	oxidized small RNA	Wild Type 17.5 dpp testes
449	GSM1096586	51	23523368	small RNA	Wild Type 20.5 dpp testes
450	GSM1096603	96	23523368	oxidized small RNA	Wild Type 20.5 dpp testes
451	GSM1096587	30	23523368	small RNA	Wild Type 6 weeks dpp testes
452	GSM1096604	40	23523368	oxidized small RNA	Wild Type 6 weeks dpp testes

1 best hit(s) with 0 mismatch(es) in GRCm38

No.	Location	Gene	RepeatMaker
Location 1	17:27324660-27324685:-

PubMed	16751777	Journal	Nature. 2006 Jul 13;442(7099):203-7.
Title	A novel class of small RNAs bind to MILI protein in mouse testes
Authors	Aravin A, Gaidatzis D, Pfeffer S, Lagos-Quintana M, Landgraf P, Iovino N, Morris P, Brownstein MJ, Kuramochi-Miyagawa S, Nakano T, Chien M, Russo JJ, Ju J, Sheridan R, Sander C, Zavolan M, Tuschl T.

PubMed	16766680	Journal	Genes Dev. 2006 Jul 1;20(13):1709-14.
Title	A novel class of small RNAs in mouse spermatogenic cells.
Authors	Grivna ST, Beyret E, Wang Z, Lin H.

PubMed	21602304	Journal	RNA. 2011 Jul;17(7):1191-203.
Title	piRNA profiling during specific stages of mouse spermatogenesis.
Authors	Gan H, Lin X, Zhang Z, Zhang W, Liao S, Wang L, Han C.

PubMed	20439430	Journal	Genes Dev. 2010 May;24(9):887-92.
Title	MVH in piRNA processing and gene silencing of retrotransposons.
Authors	Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Takamatsu K, Chuma S, Kojima-Kita K, Shiromoto Y, Asada N, Toyoda A, Fujiyama A, Totoki Y, Shibata T, Kimura T, Nakatsuji N, Noce T, Sasaki H, Nakano T.

PubMed	22020280	Journal	Nature. 2011 Oct 23;480(7376):259-63.
Title	The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements.
Authors	De Fazio S, Bartonicek N, Di Giacomo M, Abreu-Goodger C, Sankar A, Funaya C, Antony C, Moreira PN, Enright AJ, O'Carroll D.

PubMed	22902560	Journal	Mol Cell. 2012 Sep 28;47(6):970-9.
Title	A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing.
Authors	Xiol J, Cora E, Koglgruber R, Chuma S, Subramanian S, Hosokawa M, Reuter M, Yang Z, Berninger P, Palencia A, Benes V, Penninger J, Sachidanandam R, Pillai RS.

PubMed	20534472	Journal	Proc Natl Acad Sci U S A. 2010 Jun 29;107(26):11841-6.
Title	Mouse MOV10L1 associates with Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway.
Authors	Zheng K, Xiol J, Reuter M, Eckardt S, Leu NA, McLaughlin KJ, Stark A, Sachidanandam R, Pillai RS, Wang PJ.

PubMed	20059948	Journal	Dev Cell. 2009 Dec;17(6):775-87.
Title	The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline.
Authors	Shoji M, Tanaka T, Hosokawa M, Reuter M, Stark A, Kato Y, Kondoh G, Okawa K, Chujo T, Suzuki T, Hata K, Martin SL, Noce T, Kuramochi-Miyagawa S, Nakano T, Sasaki H, Pillai RS, Nakatsuji N, Chuma S.

PubMed	20022248	Journal	Curr Biol. 2009 Dec 29;19(24):2066-76.
Title	A broadly conserved pathway generates 3'UTR-directed primary piRNAs.
Authors	Robine N, Lau NC, Balla S, Jin Z, Okamura K, Kuramochi-Miyagawa S, Blower MD, Lai EC.

PubMed	26588211	Journal	PLoS Genet. 2015 Nov 20;11(11):e1005652
Title	Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Authors	Chirn GW,Rahman R,Sytnikova YA,Matts JA,Zeng M,Gerlach D,Yu M,Berger B,Naramura M, Kile BT,Lau NC.

PubMed	26115953	Journal	Genes Dev. 2015 Jul 1; 29(13): 1403?415
Title	RNF17 blocks promiscuous activity of PIWI proteins in mouse testes
Authors	Wasik KA, Tam OH, Knott SR, Falciatori I, Hammell M, Vagin VV, Hannon GJ

PubMed	23523368	Journal	Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title	An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors	Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.