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Detail Information of piRNA: piR-hsa-839

General Information
piRBase Id piR-hsa-839 Accession DQ570559
Organism Human Number of methods 1
Sequence ACCTGTGGACAAGTGACCTGCCACACTGC Number of papers 2
Length 29 Golden piRNA -
Aliases piR-30671; PIR31670;
Datasets
Dataset Accession Reads PubMed Method Tissue
1 N/A N/A 16751776 small RNA testis
176 GSM1584530 1 25818294 small RNA ovary from 2nd trimester embryos
Location in GRCh38
1 best hit(s) with 0 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 15:51280808-51280837:- MIR4713HG ENST00000559909; CYP19A1 ENST00000396402; CYP19A1 ENST00000396404; CYP19A1 ENST00000439712; CYP19A1 ENST00000557934; CYP19A1 ENST00000561075; CYP19A1 ENST00000558328; CYP19A1 ENST00000453807; CYP19A1 ENST00000557858; CYP19A1 ENST00000559980; CYP19A1 ENST00000405011; CYP19A1 ENST00000559646;
piRNA Expression
Sample CPM
GSM1584521 0
GSM1584522 0
GSM1584523 0
GSM1584524 0
GSM1584525 0
GSM1584526 0
Sample CPM
GSM1584527 0
GSM1584528 0
GSM1584529 0
GSM1584530 0.4909
GSM1584531 0
GSM1584532 0
The Expression of piRNA: piR-hsa-839
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P value calculation
Sample1
Sample2
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 16751776 Journal Nature. 2006 Jul 13;442(7099):199-202.
Title A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors Girard A, Sachidanandam R, Hannon GJ, Carmell MA.
PubMed 25818294 Journal Cell Rep. 2015 Mar 31;10(12):2069-82.
Title Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.