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Detail Information of piRNA: piR-hsa-525

General Information
piRBase Id piR-hsa-525 Accession DQ570216
Organism Human Number of methods 1
Sequence ACAAAAAATTNGCCAGGTGTGGTGGCACATGT Number of papers 2
Length 32 Golden piRNA -
Aliases piR-30328; PIR31327;
Datasets
Dataset Accession Reads PubMed Method Tissue
1 N/A N/A 16751776 small RNA testis
320 GSM4020157 1 32050423 small RNA mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Monolayer culture control
323 GSM4020160 1 32050423 small RNA mesenchymal stromal cells from bone marrow (vertebra)(age: 80 years; Male; Monolayer culture control
324 GSM4020161 3 32050423 small RNA mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Femal; Monolayer culture contro
326 GSM4020163 1 32050423 small RNA mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Osteogenic differentiatio
327 GSM4020164 1 32050423 small RNA mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Osteogenic differentiatio
330 GSM4020167 1 32050423 small RNA mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Female; Osteogenic differentiat
333 GSM4020170 1 32050423 small RNA mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Pellet culture control (d
337 GSM4020174 1 32050423 small RNA mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Female; Pellet culture control
339 GSM4020176 3 32050423 small RNA mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Chondrogenic differentiat
Location in GRCh38
7 best hit(s) with 1 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 1:162520043-162520075:- UHMK1 ENST00000545294; UHMK1 ENST00000538489; UHMK1 ENST00000489294; UHMK1 ENST00000282169; SINE Alu AluJb;
Location 2 10:107470194-107470226:+ SINE Alu AluSp;
Location 3 13:57893359-57893391:- SINE Alu AluSc8;
Location 4 2:74797890-74797922:- SINE Alu AluSz;
Location 5 2:185456954-185456986:+ ENSG00000286797 ENST00000655441; ENSG00000286797 ENST00000671641; SINE Alu AluJb;
Location 6 3:100855069-100855101:- ABI3BP ENST00000471714; ABI3BP ENST00000284322; ABI3BP ENST00000486770; ABI3BP ENST00000495063; ABI3BP ENST00000528305; ABI3BP ENST00000533855; ABI3BP ENST00000459682; SINE Alu AluSx3;
Location 7 5:97171003-97171035:+ LIX1-AS1 ENST00000504578; RIOK2 ENST00000283109; RIOK2 ENST00000508447; SINE Alu AluSp;
piRNA Expression
No record.
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 16751776 Journal Nature. 2006 Jul 13;442(7099):199-202.
Title A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors Girard A, Sachidanandam R, Hannon GJ, Carmell MA.
PubMed 32050423 Journal Cells. 2020 Feb 9;9(2):398. doi: 10.3390/cells9020398.
Title Differential Regulation of circRNA, miRNA, and piRNA during Early Osteogenic and Chondrogenic Differentiation of Human Mesenchymal Stromal Cells.
Authors Della Bella E, Menzel U, Basoli V, Tourbier C, Alini M, Stoddart MJ.