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Detail Information of piRNA: piR-hsa-4946

General Information
piRBase Id piR-hsa-4946 Accession DQ576604
Organism Human Number of methods 1
Sequence TCCTTAGGTCGCTGGTTCGAATCCGGCTCGAA Number of papers 2
Length 32 Golden piRNA -
Aliases piR-44716; PIR37715;
Datasets
Dataset Accession Reads PubMed Method Tissue
1 N/A N/A 16751776 small RNA testis
300 GSM2222674 23 29516567 small RNA neuroblastoma cell lines (IMR-32)
301 GSM2222675 264 29516567 small RNA neuroblastoma cell lines (SH-SY-5Y)
Location in GRCh38
2 best hit(s) with 0 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 6:26568913-26568945:+ tRNA tRNA tRNA-Tyr-TAC;
Location 2 6:26575624-26575656:+ tRNA tRNA tRNA-Tyr-TAC;
piRNA Expression
No record.
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 16751776 Journal Nature. 2006 Jul 13;442(7099):199-202.
Title A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors Girard A, Sachidanandam R, Hannon GJ, Carmell MA.
PubMed 29516567 Journal Genes Chromosomes Cancer. 2018 Jul;57(7):339-349. doi: 10.1002/gcc.22535.
Title Investigating piwi-interacting RNA regulome in human neuroblastoma.
Authors Roy J, Mallick B.