Loading...

Detail Information of piRNA: piR-hsa-367593

General Information
piRBase Id piR-hsa-367593 Accession N/A
Organism Human Number of methods 2
Sequence GTAAGTTGCAATACTTAATTTCTGCCA Number of papers 1
Length 27 Golden piRNA Y
Aliases N/A
Datasets
Dataset Accession Reads PubMed Method Tissue
168 GSM1584522 2 25818294 small RNA adult ovary
169 GSM1584523 10 25818294 oxidized small RNA adult ovary
170 GSM1584524 23 25818294 oxidized small RNA adult ovary
171 GSM1584525 24 25818294 small RNA ovary from 1st trimester embryos
172 GSM1584526 13 25818294 small RNA ovary from 1st trimester embryos
173 GSM1584527 38 25818294 oxidized small RNA ovary from 1st trimester embryos
175 GSM1584529 5 25818294 small RNA ovary from 2nd trimester embryos
176 GSM1584530 3 25818294 small RNA ovary from 2nd trimester embryos
177 GSM1584531 26 25818294 oxidized small RNA ovary from 2nd trimester embryos
178 GSM1584532 7 25818294 oxidized small RNA ovary from 2nd trimester embryos
Location in GRCh38
1 best hit(s) with 1 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 1:630725-630752:+ ENSG00000230021 ENST00000419394; ENSG00000230021 ENST00000634337; ENSG00000230021 ENST00000635509; ENSG00000230021 ENST00000648019; ENSG00000230021 ENST00000440200; ENSG00000230021 ENST00000440196; ENSG00000230021 ENST00000641296; ENSG00000230021 ENST00000452176;
piRNA Expression
Sample CPM
GSM1584521 0
GSM1584522 1.3806
GSM1584523 9.5179
GSM1584524 20.0564
GSM1584525 15.1379
GSM1584526 8.417
Sample CPM
GSM1584527 54.6582
GSM1584528 0
GSM1584529 2.2237
GSM1584530 1.4726
GSM1584531 3.1927
GSM1584532 8.7815
The Expression of piRNA: piR-hsa-367593
Loading...

P value calculation
Sample1
Sample2
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 25818294 Journal Cell Rep. 2015 Mar 31;10(12):2069-82.
Title Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.