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piRBase Id | piR-hsa-35391 | Accession | N/A |
---|---|---|---|
Organism | Human | Number of methods | 2 |
Sequence | CCCCCCACAACCGCGCTTGACTAGCTTGC | Number of papers | 1 |
Length | 29 | Golden piRNA | Y |
Aliases | N/A |
Dataset | Accession | Reads | PubMed | Method | Tissue |
---|---|---|---|---|---|
167 | GSM1584521 | 7 | 25818294 | small RNA | adult ovary |
168 | GSM1584522 | 6 | 25818294 | small RNA | adult ovary |
169 | GSM1584523 | 55 | 25818294 | oxidized small RNA | adult ovary |
170 | GSM1584524 | 35 | 25818294 | oxidized small RNA | adult ovary |
171 | GSM1584525 | 25 | 25818294 | small RNA | ovary from 1st trimester embryos |
172 | GSM1584526 | 34 | 25818294 | small RNA | ovary from 1st trimester embryos |
173 | GSM1584527 | 42 | 25818294 | oxidized small RNA | ovary from 1st trimester embryos |
174 | GSM1584528 | 1 | 25818294 | oxidized small RNA | ovary from 1st trimester embryos |
175 | GSM1584529 | 4 | 25818294 | small RNA | ovary from 2nd trimester embryos |
176 | GSM1584530 | 6 | 25818294 | small RNA | ovary from 2nd trimester embryos |
177 | GSM1584531 | 13 | 25818294 | oxidized small RNA | ovary from 2nd trimester embryos |
178 | GSM1584532 | 1 | 25818294 | oxidized small RNA | ovary from 2nd trimester embryos |
No. | Location | Gene | RepeatMaker |
---|---|---|---|
Location 1 | 7:148941536-148941565:+ | ENSG00000286171 ENST00000651540; | scRNA scRNA HY5; |
Sample | CPM |
---|---|
GSM1584521 | 6.291 |
GSM1584522 | 4.1419 |
GSM1584523 | 52.3484 |
GSM1584524 | 30.5206 |
GSM1584525 | 15.7687 |
GSM1584526 | 22.0136 |
Sample | CPM |
---|---|
GSM1584527 | 60.4117 |
GSM1584528 | 106.4623 |
GSM1584529 | 1.779 |
GSM1584530 | 2.9452 |
GSM1584531 | 1.5964 |
GSM1584532 | 1.2545 |
No record. |
No record. |
No record. |
No record. |
PubMed | 25818294 | Journal | Cell Rep. 2015 Mar 31;10(12):2069-82. |
---|---|---|---|
Title | Piwi proteins and piRNAs in mammalian oocytes and early embryos. | ||
Authors | Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF. |